RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 ITSN1Q15811 1721 aa7.09□□□□□ -1.27
SMAD4-208ENST00000589706 CICQ96RK0 1608 aaPredicted RBP7.09□□□□□ -1.28
SMAD4-208ENST00000589706 COL18A1P39060 1754 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 KIAA1210Q9ULL0 1709 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 LRIG2O94898 1065 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 PDGFRBP09619 1106 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 FGFR1P11362 822 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 STAT3P40763 770 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 IRX6P78412 446 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-208ENST00000589706 DDX10Q13206 875 aaKnown RBP7.08□□□□□ -1.28
SMAD4-208ENST00000589706 TRIM28Q13263 835 aaKnown RBP7.08□□□□□ -1.28
SMAD4-208ENST00000589706 ZNF787Q6DD87 383 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 NOL8Q76FK4 1167 aaKnown RBP7.08□□□□□ -1.28
SMAD4-208ENST00000589706 ARMCX6Q7L4S7 300 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 C7orf61Q8IZ16 206 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 BVESQ8NE79 360 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 NEDD1Q8NHV4 660 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 CLUHP3Q96NS8 147 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 PLVAPQ9BX97 442 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 MRPL4Q9BYD3 311 aaKnown RBP7.08□□□□□ -1.28
SMAD4-208ENST00000589706 WHRNQ9P202 907 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 ATP8A1Q9Y2Q0 1164 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 ZNF451Q9Y4E5 1061 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 TRPM1Q7Z4N2 1603 aa7.08□□□□□ -1.28
SMAD4-208ENST00000589706 FSD2A1L4K1 749 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 NOP56O00567 594 aaKnown RBP7.07□□□□□ -1.28
SMAD4-208ENST00000589706 PRODHO43272 600 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 PDE8AO60658 829 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 CAPNS1P04632 268 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 PABPC1P11940 636 aaKnown RBP7.07□□□□□ -1.28
SMAD4-208ENST00000589706 CD247P20963 164 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 MRE11P49959 708 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
SMAD4-208ENST00000589706 RNF4P78317 190 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 AUHQ13825 339 aaKnown RBP7.07□□□□□ -1.28
SMAD4-208ENST00000589706 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 NSMFQ6X4W1 530 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 JAMLQ86YT9 394 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 KREMEN1Q96MU8 473 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 ZNF830Q96NB3 372 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-208ENST00000589706 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 CCDC7Q96M83 1385 aa7.07□□□□□ -1.28
SMAD4-208ENST00000589706 RGPD5Q99666 1765 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 DNAJC25-GNG10A0A024R161 153 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 S100BP04271 92 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 ELNP15502 786 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 POU3F3P20264 500 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 SOX5P35711 763 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 GRIA2P42262 883 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 CTCFP49711 727 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 CT47A1Q5JQC4 288 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 LINC00114Q6XXX2 140 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 AGGF1Q8N302 714 aaeCLIP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 TMEM130Q8N3G9 435 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 PRPF38AQ8NAV1 312 aaKnown RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 DNAJB8Q8NHS0 232 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 MRGPRX3Q96LB0 322 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 FAM126AQ9BYI3 521 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 YY1AP1Q9H869 796 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 GP6Q9HCN6 339 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 ENAMQ9NRM1 1142 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 HOMER2Q9NSB8 354 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 CCNL1Q9UK58 526 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-208ENST00000589706 AKT3Q9Y243 479 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 PPIP5K1Q6PFW1 1433 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 ABCC6O95255 1503 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 KCPQ6ZWJ8 1503 aa7.06□□□□□ -1.28
SMAD4-208ENST00000589706 C10orf71Q711Q0 1435 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 KRBA1A5PL33 1030 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 DYNC1I1O14576 645 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 SHOXO15266 292 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 TBX1O43435 398 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 OFD1O75665 1012 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 ITGA4P13612 1032 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 LBX1P52954 281 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 NFKB2Q00653 900 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 LETMD1Q6P1Q0 360 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 POMZP3Q6PJE2 187 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 CDH24Q86UP0 819 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 FERMT3Q86UX7 667 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 ARHGEF25Q86VW2 580 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 OSBP2Q969R2 916 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-208ENST00000589706 MIPEPQ99797 713 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 INTS7Q9NVH2 962 aaKnown RBP7.05□□□□□ -1.28
SMAD4-208ENST00000589706 EMC9Q9Y3B6 208 aa7.05□□□□□ -1.28
SMAD4-208ENST00000589706 PIK3C2AO00443 1686 aa7.04□□□□□ -1.28
SMAD4-208ENST00000589706 A0A087WZG4 1122 aa7.04□□□□□ -1.28
SMAD4-208ENST00000589706 GSG1L2A8MUP6 293 aa7.04□□□□□ -1.28
SMAD4-208ENST00000589706 F8W735 103 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-208ENST00000589706 IL2RBP14784 551 aa7.04□□□□□ -1.28
SMAD4-208ENST00000589706 SDSP20132 328 aa7.04□□□□□ -1.28
SMAD4-208ENST00000589706 MCCP23508 829 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms