RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 ZNF543Q08ER8 600 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 ALYREFQ86V81 257 aaKnown RBP17.95■□□□□ 0.46
IFT20-216ENST00000588477 FAM178BQ8IXR5 827 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 GJD3Q8N144 294 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.95■□□□□ 0.46
IFT20-216ENST00000588477 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 GTF2IRD1Q9UHL9 959 aa17.95■□□□□ 0.46
IFT20-216ENST00000588477 MUC6Q6W4X9 2439 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 IL9P15248 144 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 KCNA5P22460 613 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 ARHGAP1Q07960 439 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 RBL2Q08999 1139 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 IKBKEQ14164 716 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 LEXMQ3ZCV2 418 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 C7orf31Q8N865 590 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 TBC1D5Q92609 795 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 HDAC6Q9UBN7 1215 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
IFT20-216ENST00000588477 PRR33A8MZF0 331 aa17.93■□□□□ 0.46
IFT20-216ENST00000588477 SSTR3P32745 418 aaPredicted RBP17.93■□□□□ 0.46
IFT20-216ENST00000588477 ALX1Q15699 326 aa17.93■□□□□ 0.46
IFT20-216ENST00000588477 RGS22Q8NE09 1264 aa17.93■□□□□ 0.46
IFT20-216ENST00000588477 TAAR1Q96RJ0 339 aa17.93■□□□□ 0.46
IFT20-216ENST00000588477 RALGAPA2Q2PPJ7 1873 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 EFCAB14O75071 495 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 FGAP02671 866 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 GOLGA8HP0CJ92 632 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 MX1P20591 662 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 PSEN2P49810 448 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 DGKDQ16760 1214 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 ZNF618Q5T7W0 954 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 PTCRAQ6ISU1 281 aaPredicted RBP17.92■□□□□ 0.46
IFT20-216ENST00000588477 TTC14Q96N46 770 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 C17orf80Q9BSJ5 609 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 CPVLQ9H3G5 476 aa17.92■□□□□ 0.46
IFT20-216ENST00000588477 PTK7Q13308 1070 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 STXBP2Q15833 593 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.465e-8■■■□□ 17
IFT20-216ENST00000588477 FBXO22Q8NEZ5 403 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 NSUN6Q8TEA1 469 aaKnown RBP17.91■□□□□ 0.46
IFT20-216ENST00000588477 UIMC1Q96RL1 719 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 HELLSQ9NRZ9 838 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 COL20A1Q9P218 1284 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 INSL6Q9Y581 213 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 KAT6AQ92794 2004 aa17.91■□□□□ 0.46
IFT20-216ENST00000588477 DOCK5Q9H7D0 1870 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 HAND2P61296 217 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 ZNF200P98182 395 aaPredicted RBP17.9■□□□□ 0.46
IFT20-216ENST00000588477 MFSD10Q14728 455 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 KIAA0753Q2KHM9 967 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 TRAF7Q6Q0C0 670 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 SYTL5Q8TDW5 730 aaPredicted RBP17.9■□□□□ 0.46
IFT20-216ENST00000588477 WNT8BQ93098 351 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 KATNAL1Q9BW62 490 aa17.9■□□□□ 0.46
IFT20-216ENST00000588477 DDX41Q9UJV9 622 aaKnown RBP17.9■□□□□ 0.46
IFT20-216ENST00000588477 WDFY4Q6ZS81 3184 aa17.89■□□□□ 0.46
IFT20-216ENST00000588477 C5orf42Q9H799 3197 aa17.89■□□□□ 0.46
IFT20-216ENST00000588477 GRXCR2A6NFK2 248 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 LGR5O75473 907 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 ZNF286BP0CG31 522 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 ALADP13716 330 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 MBTPS1Q14703 1052 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.45
IFT20-216ENST00000588477 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 TRIM71Q2Q1W2 868 aaKnown RBP17.89■□□□□ 0.45
IFT20-216ENST00000588477 GPATCH4Q5T3I0 446 aaKnown RBP17.89■□□□□ 0.45
IFT20-216ENST00000588477 IWS1Q96ST2 819 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 RMDN3Q96TC7 470 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 ZKSCAN3Q9BRR0 538 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 ABCB11O95342 1321 aa17.89■□□□□ 0.45
IFT20-216ENST00000588477 HAS3O00219 553 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 ARHGEF16Q5VV41 709 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 MFSD6Q6ZSS7 791 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
IFT20-216ENST00000588477 MYOCDQ8IZQ8 938 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 DBF4BQ8NFT6 615 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 EVI5LQ96CN4 794 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
IFT20-216ENST00000588477 FAM227BQ96M60 508 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 MAF1Q9H063 256 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 MRVI1Q9Y6F6 885 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 LAMA4Q16363 1823 aa17.88■□□□□ 0.45
IFT20-216ENST00000588477 A0A0D9SFI3 127 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 H3BQ06 376 aaPredicted RBP17.87■□□□□ 0.45
IFT20-216ENST00000588477 F2P00734 622 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 AMHP03971 560 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 HSPD1P10809 573 aaKnown RBP17.87■□□□□ 0.45
IFT20-216ENST00000588477 EIF2AK2P19525 551 aaKnown RBP17.87■□□□□ 0.45
IFT20-216ENST00000588477 HTRA4P83105 476 aaPredicted RBP17.87■□□□□ 0.45
IFT20-216ENST00000588477 LAMC2Q13753 1193 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 HIC1Q14526 733 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 PUS10Q3MIT2 529 aaKnown RBP17.87■□□□□ 0.45
IFT20-216ENST00000588477 MCMDC2Q4G0Z9 681 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 MCF2L2Q86YR7 1114 aa17.87■□□□□ 0.45
IFT20-216ENST00000588477 NEK9Q8TD19 979 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms