RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SPDYE3A6NKU9 549 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 H0YGN5 161 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 CPLX1O14810 134 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 CTAGE5O15320 804 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 FOSP01100 380 aaPredicted RBP11.61□□□□□ -0.55
TPM4-207ENST00000588032 ASGR1P07306 291 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 SCG2P13521 617 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 CPT1AP50416 773 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 CCT2P78371 535 aaKnown RBP11.61□□□□□ -0.55
TPM4-207ENST00000588032 NTRK3Q16288 839 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 GNPTABQ3T906 1256 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 PCNX4Q63HM2 1172 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 MCTP2Q6DN12 878 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 TRIM22Q8IYM9 498 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 OR6J1Q8NGC5 347 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 GPKOWQ92917 476 aaPredicted RBP eCLIP11.61□□□□□ -0.551e-6■■□□□ 12.4
TPM4-207ENST00000588032 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 STARD7Q9NQZ5 370 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 POLR3EQ9NVU0 708 aa11.61□□□□□ -0.55
TPM4-207ENST00000588032 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 MCM3APO60318 1980 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 ESYT2A0FGR8 921 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 MYADML2A6NDP7 307 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 SMCO2A6NFE2 343 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 STXBP3O00186 592 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 CDKL5O76039 1030 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 GH1P01241 217 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 GNA11P29992 359 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 ADCY7P51828 1080 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 RTP1P59025 263 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 LAMC2Q13753 1193 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 C7orf61Q8IZ16 206 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 VTI1AQ96AJ9 217 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
TPM4-207ENST00000588032 MRVI1Q9Y6F6 885 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 MROH7Q68CQ1 1323 aa11.6□□□□□ -0.55
TPM4-207ENST00000588032 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
TPM4-207ENST00000588032 A6NJR5 290 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 MAFGO15525 162 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 ICAM3P32942 547 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 NEK4P51957 841 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 BEX3Q00994 111 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 AP3B2Q13367 1082 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 PKN1Q16512 942 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 LY6KQ17RY6 165 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 TMEM63BQ5T3F8 832 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 ANKRD33Q7Z3H0 272 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 NLRX1Q86UT6 975 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 FAM177A1Q8N128 213 aaPredicted RBP11.59□□□□□ -0.55
TPM4-207ENST00000588032 CCDC148Q8NFR7 591 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 INPP4AQ96PE3 977 aaPredicted RBP11.59□□□□□ -0.55
TPM4-207ENST00000588032 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 ZMYND12Q9H0C1 365 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
TPM4-207ENST00000588032 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
TPM4-207ENST00000588032 C6orf50Q9HD87 102 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 SH3GLB2Q9NR46 395 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 PRKAG2Q9UGJ0 569 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
TPM4-207ENST00000588032 LRRC37A2A6NM11 1700 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 DCDC2CA8MYV0 355 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 SPATA31C2B4DYI2 1134 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 FIBPO43427 364 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 PFKFB2O60825 505 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 RGS20O76081 388 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 ARIH2O95376 493 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 DEXIO95424 95 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 CDK7P50613 346 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 AK2P54819 239 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 MRPS9P82933 396 aaKnown RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 TRIM60Q495X7 471 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 CXCL17Q6UXB2 119 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 DHX37Q8IY37 1157 aaKnown RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 GIMAP8Q8ND71 665 aaPredicted RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 IL31RAQ8NI17 732 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 PHKBQ93100 1093 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 CDHR1Q96JP9 859 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
TPM4-207ENST00000588032 C22orf23Q9BZE7 217 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 TPCN1Q9ULQ1 816 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 ATP11BQ9Y2G3 1177 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 CENPFP49454 3210 aa11.58□□□□□ -0.56
TPM4-207ENST00000588032 ARVCFO00192 962 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
TPM4-207ENST00000588032 PURAQ00577 322 aaKnown RBP11.57□□□□□ -0.56
TPM4-207ENST00000588032 TLE2Q04725 743 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms