RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 VSIG10LQ86VR7 867 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SGMS1Q86VZ5 419 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MTG1Q9BT17 334 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC6A-203ENST00000587818 RGS20O76081 388 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 GH1P01241 217 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 CYP2C18P33260 490 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 ARHGAP1Q07960 439 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 BRDTQ58F21 947 aaPredicted RBP23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 Q7L0L9 218 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SEC63Q9UGP8 760 aaKnown RBP23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 MRVI1Q9Y6F6 885 aa23.15■■□□□ 1.3
TRAPPC6A-203ENST00000587818 SZT2Q5T011 3432 aa23.14■■□□□ 1.3
TRAPPC6A-203ENST00000587818 B4GALT4O60513 344 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 KRT32Q14532 448 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 NBPF20Q3BBV1 942 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 MFSD5Q6N075 450 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 TMTC3Q6ZXV5 915 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 GPKOWQ92917 476 aaPredicted RBP eCLIP23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 PPP4R2Q9NY27 417 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 SNX14Q9Y5W7 946 aa23.14■■□□□ 1.29
TRAPPC6A-203ENST00000587818 UMODL1Q5DID0 1318 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 HSPA4P34932 840 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 FAM47CQ5HY64 1035 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 APOA5Q6Q788 366 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 SMARCC2Q8TAQ2 1214 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 KCNB2Q92953 911 aa23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 JAKMIP1Q96N16 626 aaKnown RBP23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 ALDH8A1Q9H2A2 487 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 NAP1L2Q9ULW6 460 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC6A-203ENST00000587818 ACRP10323 421 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CSF2RAP15509 400 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CCND2P30279 289 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 C16orf59Q7L2K0 433 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 BCAS3Q9H6U6 928 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 RTEL1Q9NZ71 1219 aa23.12■■□□□ 1.29
TRAPPC6A-203ENST00000587818 KLF18A0A0U1RQI7 1052 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 MEIS2O14770 477 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 ZBTB43O43298 467 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 KPNA6O60684 536 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 MMP3P08254 477 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CYP2C9P11712 490 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CCL23P55773 120 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 SP2Q02086 613 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 DHX37Q8IY37 1157 aaKnown RBP23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 HIPK3Q9H422 1215 aa23.11■■□□□ 1.29
TRAPPC6A-203ENST00000587818 MRPS9P82933 396 aaKnown RBP23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 FGD1P98174 961 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 APOBRQ0VD83 1088 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 RTN1Q16799 776 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 Q6ZUG5 572 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 DEFB123Q8N688 67 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CUL5Q93034 780 aa23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.1■■□□□ 1.29
TRAPPC6A-203ENST00000587818 LAMC2Q13753 1193 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 TMEM199Q8N511 208 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 KAT2BQ92831 832 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 RNPC3Q96LT9 517 aaKnown RBP23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 NOC4LQ9BVI4 516 aaKnown RBP23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 SEZ6LQ9BYH1 1024 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 FAM217BQ9NTX9 383 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 V9GY48 417 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
TRAPPC6A-203ENST00000587818 GOLGA8AA7E2F4 631 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 GOLGA8BA8MQT2 603 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 REC8O95072 547 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 GGPS1O95749 300 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 HMGB1P09429 215 aaKnown RBP23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CASTP20810 708 aaKnown RBP23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 CDC27P30260 824 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 PPIGQ13427 754 aaKnown RBP eCLIP23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 UBE2SQ16763 222 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 BLOC1S2Q6QNY1 142 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 HEATR3Q7Z4Q2 680 aa23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.29
TRAPPC6A-203ENST00000587818 LAMA3Q16787 3333 aa23.08■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ADD1P35611 737 aaKnown RBP23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 FUT2Q10981 343 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 TMEM240Q5SV17 173 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 CELF3Q5SZQ8 465 aaKnown RBP23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ZNF365Q70YC5 407 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 BRF1Q92994 677 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 SCLYQ96I15 445 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 FAM161BQ96MY7 647 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 ALG1Q9BT22 464 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 CNTNAP5Q8WYK1 1306 aa23.07■■□□□ 1.28
TRAPPC6A-203ENST00000587818 PIK3CDO00329 1044 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 UBA1P22314 1058 aaKnown RBP23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 DGKDQ16760 1214 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 HSDL1Q3SXM5 330 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 GPR153Q6NV75 609 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 NFRKBQ6P4R8 1299 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 KCNV1Q6PIU1 500 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 EMID1Q96A84 441 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 SPATA33Q96N06 139 aa23.06■■□□□ 1.28
TRAPPC6A-203ENST00000587818 WNT8AQ9H1J5 351 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms