RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ATP1A1P05023 1023 aaKnown RBP22.02■■□□□ 1.12
MBD1-216ENST00000587605 TNNI2P48788 182 aa22.02■■□□□ 1.12
MBD1-216ENST00000587605 KLK7P49862 253 aa22.02■■□□□ 1.12
MBD1-216ENST00000587605 ADGRF4Q8IZF3 695 aa22.02■■□□□ 1.12
MBD1-216ENST00000587605 NOA1Q8NC60 698 aaKnown RBP22.02■■□□□ 1.12
MBD1-216ENST00000587605 VIPAS39Q9H9C1 493 aa22.02■■□□□ 1.12
MBD1-216ENST00000587605 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
MBD1-216ENST00000587605 DDX25Q9UHL0 483 aaKnown RBP22.02■■□□□ 1.12
MBD1-216ENST00000587605 PPEF1O14829 653 aaPredicted RBP22.02■■□□□ 1.11
MBD1-216ENST00000587605 HLA-DOAP06340 250 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 PICALMQ13492 652 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 FAM182BQ5T319 152 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 RUBCNQ92622 972 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 MTMR8Q96EF0 704 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 NUCKS1Q9H1E3 243 aaKnown RBP22.02■■□□□ 1.11
MBD1-216ENST00000587605 GPCPD1Q9NPB8 672 aa22.02■■□□□ 1.11
MBD1-216ENST00000587605 BMP2KQ9NSY1 1161 aaPredicted RBP22.02■■□□□ 1.11
MBD1-216ENST00000587605 ZBTB5O15062 677 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 EDIL3O43854 480 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 TACC1O75410 805 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 DDX12PQ92771 950 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 GJD4Q96KN9 370 aaPredicted RBP22.01■■□□□ 1.11
MBD1-216ENST00000587605 CCDC17Q96LX7 622 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 JRKLQ9Y4A0 524 aa22.01■■□□□ 1.11
MBD1-216ENST00000587605 PRLRP16471 622 aa22■■□□□ 1.11
MBD1-216ENST00000587605 LRRC55Q6ZSA7 311 aa22■■□□□ 1.11
MBD1-216ENST00000587605 MYOCDQ8IZQ8 938 aa22■■□□□ 1.11
MBD1-216ENST00000587605 LACRTQ9GZZ8 138 aa22■■□□□ 1.11
MBD1-216ENST00000587605 EHD4Q9H223 541 aa22■■□□□ 1.11
MBD1-216ENST00000587605 ATP6V0A2Q9Y487 856 aa22■■□□□ 1.11
MBD1-216ENST00000587605 POTEMA6NI47 508 aa22■■□□□ 1.11
MBD1-216ENST00000587605 ONECUT3O60422 494 aaPredicted RBP22■■□□□ 1.11
MBD1-216ENST00000587605 GNA14O95837 355 aa22■■□□□ 1.11
MBD1-216ENST00000587605 ITIH3Q06033 890 aa22■■□□□ 1.11
MBD1-216ENST00000587605 CASP8Q14790 479 aa22■■□□□ 1.11
MBD1-216ENST00000587605 MCTP2Q6DN12 878 aa22■■□□□ 1.11
MBD1-216ENST00000587605 CCDC70Q6NSX1 233 aa22■■□□□ 1.11
MBD1-216ENST00000587605 HHIPL2Q6UWX4 724 aa22■■□□□ 1.11
MBD1-216ENST00000587605 DYMQ7RTS9 669 aa22■■□□□ 1.11
MBD1-216ENST00000587605 CEP63Q96MT8 703 aa22■■□□□ 1.11
MBD1-216ENST00000587605 MED4Q9NPJ6 270 aa22■■□□□ 1.11
MBD1-216ENST00000587605 ENC1O14682 589 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 MARCH6O60337 910 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 IDEP14735 1019 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 HPS3Q969F9 1004 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 IFIH1Q9BYX4 1025 aaKnown RBP21.99■■□□□ 1.11
MBD1-216ENST00000587605 PDE11AQ9HCR9 933 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 USP40Q9NVE5 1235 aa21.99■■□□□ 1.11
MBD1-216ENST00000587605 H3BQF6 201 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 POLRMTO00411 1230 aaKnown RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 SHMT1P34896 483 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 FKBP3Q00688 224 aaKnown RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 CCDC96Q2M329 555 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 HSP90B2PQ58FF3 399 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 ZNF572Q7Z3I7 529 aaPredicted RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 NEK11Q8NG66 645 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 CAGE1Q8TC20 777 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 FAM71BQ8TC56 605 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 SYN2Q92777 582 aaPredicted RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 MMS19Q96T76 1030 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 DEF6Q9H4E7 631 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 PSTPIP2Q9H939 334 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 HDAC6Q9UBN7 1215 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 ATF5Q9Y2D1 282 aaPredicted RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 PCDHA13Q9Y5I0 950 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 MYH4Q9Y623 1939 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 SSU72P8A0A1W2PR75 194 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 RCCD1A6NED2 376 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 TFRCP02786 760 aaKnown RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 KIF11P52732 1056 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 COASYQ13057 564 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 C2CD5Q86YS7 1000 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 CCDC65Q8IXS2 484 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 EEF2KMTQ96G04 330 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 ALS2CR12Q96Q35 445 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 ZC3H12CQ9C0D7 883 aaKnown RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 SH2D4AQ9H788 454 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 MMRN2Q9H8L6 949 aa21.98■■□□□ 1.11
MBD1-216ENST00000587605 DDX4Q9NQI0 724 aaKnown RBP21.98■■□□□ 1.11
MBD1-216ENST00000587605 PJA2O43164 708 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 USP11P51784 963 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 DDR1Q08345 913 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 MAPK8IP2Q13387 824 aaPredicted RBP21.97■■□□□ 1.11
MBD1-216ENST00000587605 ZCWPW2Q504Y3 356 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 FAM26FQ5R3K3 315 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 MOXD1Q6UVY6 613 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 CCDC155Q8N6L0 562 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 HAS1Q92839 578 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 DNAJC19Q96DA6 116 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 ARHGAP20Q9P2F6 1191 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 PCDHA12Q9UN75 941 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 COL4A3BPQ9Y5P4 624 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 MYH7BA7E2Y1 1941 aa21.97■■□□□ 1.11
MBD1-216ENST00000587605 ERICH4A6NGS2 130 aa21.96■■□□□ 1.11
MBD1-216ENST00000587605 PPP1R11O60927 126 aaPredicted RBP21.96■■□□□ 1.11
MBD1-216ENST00000587605 UBE2SQ16763 222 aa21.96■■□□□ 1.11
MBD1-216ENST00000587605 DCAF4Q8WV16 495 aa21.96■■□□□ 1.11
MBD1-216ENST00000587605 ZCCHC17Q9NP64 241 aaKnown RBP21.96■■□□□ 1.11
MBD1-216ENST00000587605 FAM207AQ9NSI2 230 aaPredicted RBP21.96■■□□□ 1.11
MBD1-216ENST00000587605 ADAM21Q9UKJ8 722 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms