RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 MTG1Q9BT17 334 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 KATNAL1Q9BW62 490 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 PDLIM7Q9NR12 457 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-206ENST00000587509 MYL3P08590 195 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 RAG1P15918 1043 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 ADCY7P51828 1080 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 LAMC2Q13753 1193 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 MCTP2Q6DN12 878 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 CMTR1Q8N1G2 835 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 TBC1D5Q92609 795 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 EMID1Q96A84 441 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 GDF15Q99988 308 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-206ENST00000587509 A6NJR5 290 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 CPLX1O14810 134 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 CTAGE5O15320 804 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 FIBPO43427 364 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 SUPT20HL2P0C7V6 817 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 ITGA7Q13683 1181 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 DGKDQ16760 1214 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 PCNX4Q63HM2 1172 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 NLRX1Q86UT6 975 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 VSIG10LQ86VR7 867 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 DHX37Q8IY37 1157 aaKnown RBP13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 TDHQ8IZJ6 230 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 CCDC148Q8NFR7 591 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 PPTC7Q8NI37 304 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
PRKCSH-206ENST00000587509 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 KIAA0355O15063 1070 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 CDKL5O76039 1030 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 MMP3P08254 477 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 CPA1P15085 419 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 PURAQ00577 322 aaKnown RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 NEDD9Q14511 834 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 WWC2Q6AWC2 1192 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 NOD1Q9Y239 953 aa13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-206ENST00000587509 ARIH2O95376 493 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 SCG2P13521 617 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 GNA11P29992 359 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 PTPN11Q06124 597 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 USP17L6PQ6QN14 398 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 RNF26Q9BY78 433 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 UPF3BQ9BZI7 483 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 RIC8AQ9NPQ8 531 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
PRKCSH-206ENST00000587509 hCG_1642624A0A1W2PR95 340 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 MEIS2O14770 477 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 GGPS1O95749 300 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 UBA1P22314 1058 aaKnown RBP13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 CDK7P50613 346 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 EVCP57679 992 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 FPGSQ05932 587 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 ARHGAP1Q07960 439 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.263e-8■□□□□ 8.3
PRKCSH-206ENST00000587509 FAM177A1Q8N128 213 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 TMEM199Q8N511 208 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 SLC43A3Q8NBI5 491 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 ZNF274Q96GC6 653 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 SPATA33Q96N06 139 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 TBX21Q9UL17 535 aa13.43□□□□□ -0.26
PRKCSH-206ENST00000587509 LTBP2Q14767 1821 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms