RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MROH7Q68CQ1 1323 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 MEIS2O14770 477 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 GH1P01241 217 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 MYL3P08590 195 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 ANAPC15P60006 121 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 UBE2SQ16763 222 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 LY6KQ17RY6 165 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 POLR3EQ9NVU0 708 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 PCDH10Q9P2E7 1040 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
ATG4D-207ENST00000587256 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 CLTBP09497 229 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 ADCY7P51828 1080 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 CCT2P78371 535 aaKnown RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 CCDC62Q6P9F0 684 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
ATG4D-207ENST00000587256 ZFP91Q96JP5 570 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
ATG4D-207ENST00000587256 STXBP3O00186 592 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 EVCP57679 992 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
ATG4D-207ENST00000587256 ARHGAP1Q07960 439 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 GNPTABQ3T906 1256 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
ATG4D-207ENST00000587256 TYW1BQ6NUM6 668 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 PHKBQ93100 1093 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 EHMT1Q9H9B1 1298 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
ATG4D-207ENST00000587256 BARHL2Q9NY43 387 aa17.02■□□□□ 0.32
ATG4D-207ENST00000587256 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
ATG4D-207ENST00000587256 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.31
ATG4D-207ENST00000587256 DNAH12Q6ZR08 3092 aa17.02■□□□□ 0.31
ATG4D-207ENST00000587256 ARVCFO00192 962 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 CPLX1O14810 134 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
ATG4D-207ENST00000587256 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 STAM2O75886 525 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 RGS20O76081 388 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 SCG2P13521 617 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 PSMC6P62333 389 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
ATG4D-207ENST00000587256 STK3Q13188 491 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 ITGA7Q13683 1181 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-207ENST00000587256 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 ANKRD33Q7Z3H0 272 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 AFG1LQ8WV93 481 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 TOX2Q96NM4 488 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 GDF15Q99988 308 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
ATG4D-207ENST00000587256 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
ATG4D-207ENST00000587256 SLC26A6Q9BXS9 759 aa17.01■□□□□ 0.31
ATG4D-207ENST00000587256 LTBP2Q14767 1821 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 A6NJR5 290 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 SORBS3O60504 671 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 KPNA6O60684 536 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 MMP3P08254 477 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 UBA1P22314 1058 aaKnown RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 XRRA1Q6P2D8 792 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 SH3RF1Q7Z6J0 888 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 ZNF274Q96GC6 653 aaPredicted RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 UBE2OQ9C0C9 1292 aaKnown RBP17■□□□□ 0.31
ATG4D-207ENST00000587256 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 TMEM39AQ9NV64 488 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
ATG4D-207ENST00000587256 TRIM43BA6NCK2 446 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 PRPF3O43395 683 aaKnown RBP16.99■□□□□ 0.31
ATG4D-207ENST00000587256 SEC24BO95487 1268 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 GGPS1O95749 300 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 IFNAR1P17181 557 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
ATG4D-207ENST00000587256 LAMC2Q13753 1193 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 CPLX2Q6PUV4 134 aaKnown RBP16.99■□□□□ 0.31
ATG4D-207ENST00000587256 TEX2Q8IWB9 1127 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 FAM126BQ8IXS8 530 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 EMID1Q96A84 441 aaPredicted RBP16.99■□□□□ 0.31
ATG4D-207ENST00000587256 TRIM43Q96BQ3 446 aaPredicted RBP16.99■□□□□ 0.31
ATG4D-207ENST00000587256 SEZ6LQ9BYH1 1024 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
ATG4D-207ENST00000587256 FIBPO43427 364 aa16.98■□□□□ 0.31
ATG4D-207ENST00000587256 TGFB3P10600 412 aa16.98■□□□□ 0.31
ATG4D-207ENST00000587256 RAG1P15918 1043 aa16.98■□□□□ 0.31
ATG4D-207ENST00000587256 CDK7P50613 346 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms