RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 DCTN3O75935 186 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
RNF43-208ENST00000584437 GJA10Q969M2 543 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 ZNF653Q96CK0 615 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 PCDHA4Q9UN74 947 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 MRPL11Q9Y3B7 192 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 MFAP3LO75121 409 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 CPXCR1Q8N123 301 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 SAMSN1Q9NSI8 373 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 IPO11Q9UI26 975 aaKnown RBP14.16□□□□□ -0.14
RNF43-208ENST00000584437 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 INPP1P49441 399 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 SERPINI1Q99574 410 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 CCDC68Q9H2F9 335 aa14.16□□□□□ -0.14
RNF43-208ENST00000584437 FTCDO95954 541 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 HACE1Q8IYU2 909 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 MMP1P03956 469 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 PSMD2Q13200 908 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 XKR9Q5GH70 373 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 TTLL7Q6ZT98 887 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 DACT3Q96B18 629 aaPredicted RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 HDAC11Q96DB2 347 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 DIS3Q9Y2L1 958 aaKnown RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 POLR2MP0CAP2 368 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 ECE1P42892 770 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 DR1Q01658 176 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 DMP1Q13316 513 aaPredicted RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 KRT80Q6KB66 452 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 CYP4F22Q6NT55 531 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 MYOM2P54296 1465 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 ANO9A1A5B4 782 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 GOLGA8CPA6NN73 597 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 CXCR5P32302 372 aa14.15□□□□□ -0.14
RNF43-208ENST00000584437 RSBN1LQ6PCB5 846 aaPredicted RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 TRIM56Q9BRZ2 755 aaKnown RBP14.15□□□□□ -0.14
RNF43-208ENST00000584437 CIAO1O76071 339 aa14.15□□□□□ -0.15
RNF43-208ENST00000584437 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.15
RNF43-208ENST00000584437 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.15□□□□□ -0.15
RNF43-208ENST00000584437 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.15
RNF43-208ENST00000584437 CCDC127Q96BQ5 260 aa14.15□□□□□ -0.15
RNF43-208ENST00000584437 MID2Q9UJV3 735 aa14.15□□□□□ -0.15
RNF43-208ENST00000584437 DLATP10515 647 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 TBC1D1Q86TI0 1168 aaPredicted RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 FBXO11Q86XK2 927 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 UNC5CLQ8IV45 518 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 LRRC43Q8N309 656 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 NRBF2Q96F24 287 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 KIAA1024Q9UPX6 916 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 ORC6Q9Y5N6 252 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 TTI1O43156 1089 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 KPNA2P52292 529 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 ODR4Q5SWX8 454 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 SMYD4Q8IYR2 804 aaPredicted RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 NACA2Q9H009 215 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 MRPL47Q9HD33 250 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 GINS2Q9Y248 185 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 EXOC1LA0A1B0GW35 172 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 IPO5O00410 1097 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 CAPN9O14815 690 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 ABTB1Q969K4 478 aaPredicted RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 A6NJR5 290 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 hCG_1984214I3L0E3 225 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 IFNAR1P17181 557 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 PRPSAP1Q14558 356 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 RFX6Q8HWS3 928 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 ZNF713Q8N859 430 aaPredicted RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
RNF43-208ENST00000584437 MRPL46Q9H2W6 279 aaKnown RBP14.14□□□□□ -0.15
RNF43-208ENST00000584437 CPP00450 1065 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 TMEM191BP0C7N4 346 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 RAB44Q7Z6P3 723 aaPredicted RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 SDR42E1Q8WUS8 393 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 CCDC124Q96CT7 223 aaKnown RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 MORC2Q9Y6X9 1032 aaPredicted RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 ATG16L1Q676U5 607 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 ARHGEF25Q86VW2 580 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 PLA2G4DQ86XP0 818 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 GPHNQ9NQX3 736 aaPredicted RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 PODXLO00592 558 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 SLCO1A2P46721 670 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 NUGGCQ68CJ6 796 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 DNAJC10Q8IXB1 793 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 ZBTB38Q8NAP3 1195 aaPredicted RBP14.13□□□□□ -0.15
RNF43-208ENST00000584437 NFU1Q9UMS0 254 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 PIK3CAP42336 1068 aa14.13□□□□□ -0.15
RNF43-208ENST00000584437 RPS8P62241 208 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms