RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
COPS3-218ENST00000584216 LINC01553A4QN01 128 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 FAM86C2PA6NEL3 165 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 SNHG28P0DPA3 235 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 SSTR3P32745 418 aaPredicted RBP15.65■□□□□ 0.1
COPS3-218ENST00000584216 NT5C2P49902 561 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 ARHGAP1Q07960 439 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 PTPROQ16827 1216 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 USH1GQ495M9 461 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 SEPT14Q6ZU15 432 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 SPRED2Q7Z698 418 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 FAM178BQ8IXR5 827 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 EMID1Q96A84 441 aaPredicted RBP15.65■□□□□ 0.1
COPS3-218ENST00000584216 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 CTAGE1Q96RT6 745 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 FAM50BQ9Y247 325 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 ABCB11O95342 1321 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 ZMYM6O95789 1325 aa15.65■□□□□ 0.1
COPS3-218ENST00000584216 NBNO60934 754 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 AMHP03971 560 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 KCNA5P22460 613 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 GPNMBQ14956 572 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 LY6KQ17RY6 165 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 CSPP1Q1MSJ5 1256 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 VPS53Q5VIR6 699 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 CHST3Q7LGC8 479 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 TMCO2Q7Z6W1 182 aaPredicted RBP15.64■□□□□ 0.09
COPS3-218ENST00000584216 FBXO22Q8NEZ5 403 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 DHX38Q92620 1227 aaKnown RBP15.64■□□□□ 0.09
COPS3-218ENST00000584216 KAT2BQ92831 832 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 KHSRPQ92945 711 aaKnown RBP eCLIP15.64■□□□□ 0.093e-8■■■■■ 29
COPS3-218ENST00000584216 SAMD11Q96NU1 681 aa15.64■□□□□ 0.09
COPS3-218ENST00000584216 RNF41Q9H4P4 317 aaPredicted RBP15.64■□□□□ 0.09
COPS3-218ENST00000584216 COL4A4P53420 1690 aaPredicted RBP15.63■□□□□ 0.09
COPS3-218ENST00000584216 F2P00734 622 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 FGAP02671 866 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 PSEN2P49810 448 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 LAMC2Q13753 1193 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 MFSD10Q14728 455 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 TIGD5Q53EQ6 642 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 PTCRAQ6ISU1 281 aaPredicted RBP15.63■□□□□ 0.09
COPS3-218ENST00000584216 MFSD6Q6ZSS7 791 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 MRPL38Q96DV4 380 aaKnown RBP15.63■□□□□ 0.09
COPS3-218ENST00000584216 RMDN3Q96TC7 470 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 HDAC6Q9UBN7 1215 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 MRVI1Q9Y6F6 885 aa15.63■□□□□ 0.09
COPS3-218ENST00000584216 LGR5O75473 907 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 EIF3JO75822 258 aaKnown RBP15.62■□□□□ 0.09
COPS3-218ENST00000584216 CDC37Q16543 378 aaPredicted RBP15.62■□□□□ 0.09
COPS3-218ENST00000584216 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 CCDC178Q5BJE1 867 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 ARHGEF16Q5VV41 709 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 FAM117BQ6P1L5 589 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
COPS3-218ENST00000584216 SYTL5Q8TDW5 730 aaPredicted RBP15.62■□□□□ 0.09
COPS3-218ENST00000584216 ESR2Q92731 530 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 CD320Q9NPF0 282 aa15.62■□□□□ 0.09
COPS3-218ENST00000584216 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
COPS3-218ENST00000584216 ZNF618Q5T7W0 954 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 KCNV1Q6PIU1 500 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 DGKHQ86XP1 1220 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.61■□□□□ 0.09
COPS3-218ENST00000584216 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
COPS3-218ENST00000584216 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 UIMC1Q96RL1 719 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
COPS3-218ENST00000584216 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
COPS3-218ENST00000584216 GRXCR2A6NFK2 248 aa15.6■□□□□ 0.09
COPS3-218ENST00000584216 HAS3O00219 553 aa15.6■□□□□ 0.09
COPS3-218ENST00000584216 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
COPS3-218ENST00000584216 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
COPS3-218ENST00000584216 MFAP1P55081 439 aaKnown RBP15.6■□□□□ 0.09
COPS3-218ENST00000584216 IQCA1Q86XH1 822 aa15.6■□□□□ 0.09
COPS3-218ENST00000584216 MYOCDQ8IZQ8 938 aa15.6■□□□□ 0.09
COPS3-218ENST00000584216 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 DCXO43602 365 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 ZNF286BP0CG31 522 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 GOLGA8HP0CJ92 632 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 IL9P15248 144 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 HAND2P61296 217 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 HTRA4P83105 476 aaPredicted RBP15.59■□□□□ 0.09
COPS3-218ENST00000584216 TRIM71Q2Q1W2 868 aaKnown RBP15.59■□□□□ 0.09
COPS3-218ENST00000584216 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 ALYREFQ86V81 257 aaKnown RBP15.59■□□□□ 0.09
COPS3-218ENST00000584216 PNMA1Q8ND90 353 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 NEK9Q8TD19 979 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
COPS3-218ENST00000584216 YME1L1Q96TA2 773 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 C17orf80Q9BSJ5 609 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 UBA5Q9GZZ9 404 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
COPS3-218ENST00000584216 NCK2O43639 380 aa15.58■□□□□ 0.08
COPS3-218ENST00000584216 DHX16O60231 1041 aaKnown RBP15.58■□□□□ 0.08
COPS3-218ENST00000584216 CAND2O75155 1236 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms