RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 CCDC155Q8N6L0 562 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 RGS22Q8NE09 1264 aa18.93■□□□□ 0.62
SREBF1-221ENST00000583080 HLA-CQ95604 372 aa18.92■□□□□ 0.62
SREBF1-221ENST00000583080 FAM122AQ96E09 287 aa18.92■□□□□ 0.62
SREBF1-221ENST00000583080 ZBTB47Q9UFB7 747 aaPredicted RBP18.92■□□□□ 0.62
SREBF1-221ENST00000583080 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
SREBF1-221ENST00000583080 MTUS1Q9ULD2 1270 aa18.92■□□□□ 0.62
SREBF1-221ENST00000583080 ABCB11O95342 1321 aa18.92■□□□□ 0.62
SREBF1-221ENST00000583080 ZNF286BP0CG31 522 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 PCP11498 1178 aaKnown RBP18.91■□□□□ 0.62
SREBF1-221ENST00000583080 RBL2Q08999 1139 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 CNKSR3Q6P9H4 555 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 PNMA1Q8ND90 353 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 NSUN6Q8TEA1 469 aaKnown RBP18.91■□□□□ 0.62
SREBF1-221ENST00000583080 ESR2Q92731 530 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 KHSRPQ92945 711 aaKnown RBP eCLIP18.91■□□□□ 0.62
SREBF1-221ENST00000583080 WNT8BQ93098 351 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 HDAC6Q9UBN7 1215 aa18.91■□□□□ 0.62
SREBF1-221ENST00000583080 CXCL10P02778 98 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 CKBP12277 381 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
SREBF1-221ENST00000583080 QRICH1Q2TAL8 776 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 TRAF7Q6Q0C0 670 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 ADGRF4Q8IZF3 695 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 RMDN3Q96TC7 470 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 ALG1Q9BT22 464 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 LRFN3Q9BTN0 628 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 ZBED2Q9BTP6 218 aa18.9■□□□□ 0.62
SREBF1-221ENST00000583080 RNF41Q9H4P4 317 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-221ENST00000583080 DDX41Q9UJV9 622 aaKnown RBP18.9■□□□□ 0.62
SREBF1-221ENST00000583080 SIP14410 1827 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 TRIM6-TRIM34B2RNG4 842 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 KDM4AO75164 1064 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 GJB5O95377 273 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 CASTP20810 708 aaKnown RBP18.89■□□□□ 0.61
SREBF1-221ENST00000583080 PSEN2P49810 448 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 MBTPS1Q14703 1052 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 STXBP2Q15833 593 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 DGKDQ16760 1214 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 TRIM71Q2Q1W2 868 aaKnown RBP18.89■□□□□ 0.61
SREBF1-221ENST00000583080 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 MYH6P13533 1939 aa18.89■□□□□ 0.61
SREBF1-221ENST00000583080 F2P00734 622 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
SREBF1-221ENST00000583080 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-221ENST00000583080 HIC1Q14526 733 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 MFSD10Q14728 455 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 FAM117BQ6P1L5 589 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 C7orf31Q8N865 590 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 IWS1Q96ST2 819 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 SUGCTQ9HAC7 445 aa18.88■□□□□ 0.61
SREBF1-221ENST00000583080 LINC01553A4QN01 128 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 B4E1Z4 1266 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 HAS3O00219 553 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 OPLAHO14841 1288 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 SORBS3O60504 671 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 KIAA0753Q2KHM9 967 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 ZNF618Q5T7W0 954 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 ARHGEF16Q5VV41 709 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-221ENST00000583080 EMID1Q96A84 441 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-221ENST00000583080 LNPKQ9C0E8 428 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 KAT14Q9H8E8 782 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 JMJD4Q9H9V9 463 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 CD320Q9NPF0 282 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 C11orf16Q9NQ32 467 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 PXMP2Q9NR77 195 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
SREBF1-221ENST00000583080 ABHD14A-ACY1A0A1B0GW23 586 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 FAM86C2PA6NEL3 165 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 DHX16O60231 1041 aaKnown RBP18.86■□□□□ 0.61
SREBF1-221ENST00000583080 NR3C2P08235 984 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 ERVK-21P61565 698 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 PTK7Q13308 1070 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 HDAC1Q13547 482 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-221ENST00000583080 IQCA1Q86XH1 822 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 FBXO11Q86XK2 927 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 TICAM2Q86XR7 235 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 PPTC7Q8NI37 304 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 TGS1Q96RS0 853 aaKnown RBP18.86■□□□□ 0.61
SREBF1-221ENST00000583080 ZSCAN10Q96SZ4 725 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-221ENST00000583080 RAD9AQ99638 391 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 KATNAL1Q9BW62 490 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 MAF1Q9H063 256 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
SREBF1-221ENST00000583080 MRPL11Q9Y3B7 192 aaKnown RBP18.86■□□□□ 0.61
SREBF1-221ENST00000583080 MYH7BA7E2Y1 1941 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 ZNF213O14771 459 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 EIF3JO75822 258 aaKnown RBP18.85■□□□□ 0.61
SREBF1-221ENST00000583080 RGS20O76081 388 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 PARNO95453 639 aaKnown RBP18.85■□□□□ 0.61
SREBF1-221ENST00000583080 CFBP00751 764 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 SDSP20132 328 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 TMEM31Q5JXX7 168 aa18.85■□□□□ 0.61
SREBF1-221ENST00000583080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms