RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 SYNPO2Q9UMS6 1093 aa11□□□□□ -0.65
GGA3-212ENST00000582376 GVINP1Q7Z2Y8 2422 aa11□□□□□ -0.65
GGA3-212ENST00000582376 EMSYQ7Z589 1322 aa11□□□□□ -0.65
GGA3-212ENST00000582376 RBAK-RBAKDNI3L0D1 243 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 CSPG5O95196 566 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 PDE4BQ07343 736 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 ZBTB33Q86T24 672 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 MKNK2Q9HBH9 465 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 HDAC6Q9UBN7 1215 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 RWDD3Q9Y3V2 267 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 USP15Q9Y4E8 981 aaPredicted RBP10.99□□□□□ -0.65
GGA3-212ENST00000582376 RALGAPA2Q2PPJ7 1873 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 LCTP09848 1927 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 ATG2AQ2TAZ0 1938 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 C5orf42Q9H799 3197 aa10.99□□□□□ -0.65
GGA3-212ENST00000582376 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 IGKV6D-41A0A0C4DH26 115 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 GOLIM4O00461 696 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 BCAR3O75815 825 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 TXNP10599 105 aaKnown RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 BMPR1AP36894 532 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 PDE4DQ08499 809 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 SLFN5Q08AF3 891 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 BAATQ14032 418 aaPredicted RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
GGA3-212ENST00000582376 TRIM71Q2Q1W2 868 aaKnown RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 STK11IPQ8N1F8 1099 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 C7orf31Q8N865 590 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 TMEM105Q8N8V8 129 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 KAT2BQ92831 832 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 IL17RAQ96F46 866 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 IFIH1Q9BYX4 1025 aaKnown RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 CLEC1BQ9P126 229 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 ARPP21Q9UBL0 812 aaPredicted RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 CCPG1Q9ULG6 757 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 NOP58Q9Y2X3 529 aaKnown RBP10.98□□□□□ -0.65
GGA3-212ENST00000582376 SLC4A4Q9Y6R1 1079 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 ZBED9Q6R2W3 1325 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 TRIOO75962 3097 aa10.98□□□□□ -0.65
GGA3-212ENST00000582376 MYH4Q9Y623 1939 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 RSPH10B2B2RC85 870 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 TTLL1O95922 423 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 MMP1P03956 469 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 MMP3P08254 477 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
GGA3-212ENST00000582376 RSPH10BP0C881 870 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 ATF7P17544 494 aaPredicted RBP10.97□□□□□ -0.65
GGA3-212ENST00000582376 CASTP20810 708 aaKnown RBP10.97□□□□□ -0.65
GGA3-212ENST00000582376 SNAP25P60880 206 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 PLEKHG4Q58EX7 1191 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 AACSQ86V21 672 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 EFHBQ8N7U6 833 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 SEPT8Q92599 483 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 WNT8BQ93098 351 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 CEP95Q96GE4 821 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 DNAJC2Q99543 621 aaKnown RBP10.97□□□□□ -0.65
GGA3-212ENST00000582376 MPHOSPH6Q99547 160 aaKnown RBP10.97□□□□□ -0.65
GGA3-212ENST00000582376 ALG1Q9BT22 464 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 MTMR4Q9NYA4 1195 aa10.97□□□□□ -0.65
GGA3-212ENST00000582376 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.65
GGA3-212ENST00000582376 PTPDC1A2A3K4 754 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 PLA2G6O60733 806 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 ADD2P35612 726 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 SLC1A4P43007 532 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 PSEN2P49810 448 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 SLFNL1Q499Z3 407 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 KATNAL1Q9BW62 490 aa10.96□□□□□ -0.65
GGA3-212ENST00000582376 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.66
GGA3-212ENST00000582376 NCOR2Q9Y618 2525 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
GGA3-212ENST00000582376 ARIH2O95376 493 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 ICAM1P05362 532 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 LINC00271P0C7V0 271 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 THPOP40225 353 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 ZNF200P98182 395 aaPredicted RBP10.95□□□□□ -0.66
GGA3-212ENST00000582376 ASTLQ6HA08 431 aaPredicted RBP10.95□□□□□ -0.66
GGA3-212ENST00000582376 KIAA2013Q8IYS2 634 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 ZNF444Q8N0Y2 327 aaPredicted RBP10.95□□□□□ -0.66
GGA3-212ENST00000582376 CHMP4CQ96CF2 233 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
GGA3-212ENST00000582376 BARX2Q9UMQ3 279 aaPredicted RBP10.95□□□□□ -0.66
GGA3-212ENST00000582376 B4DLN1 442 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 NFIBO00712 420 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 GH1P01241 217 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 MCCP23508 829 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 EDNRBP24530 442 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 CALML3P27482 149 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 MRPL12P52815 198 aaKnown RBP10.94□□□□□ -0.66
GGA3-212ENST00000582376 CAMK1Q14012 370 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 MFSD10Q14728 455 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 DGKDQ16760 1214 aa10.94□□□□□ -0.66
GGA3-212ENST00000582376 SBK1Q52WX2 424 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms