RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, human

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-213	ENST00000581625	CCDC194	A0A1B0GVG4	234 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	CNGA1	P29973	690 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	CCND3	P30281	292 aa	Predicted RBP	18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	EEPD1	Q7L9B9	569 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	SCFD2	Q8WU76	684 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	CRYGN	Q8WXF5	182 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	INPP4A	Q96PE3	977 aa	Predicted RBP	18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	RNF208	Q9H0X6	261 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	UNC93B1	Q9H1C4	597 aa		18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	FOXP1	Q9H334	677 aa	Predicted RBP	18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	DDX20	Q9UHI6	824 aa	Known RBP	18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	DDX49	Q9Y6V7	483 aa	Known RBP	18.21	■□□□□ 0.51
CCDC57-213	ENST00000581625	RBM47	A0AV96	593 aa	Known RBP	18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625		H3BQV1	296 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	ADAMTS3	O15072	1205 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	CYP3A4	P08684	503 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	CAPN2	P17655	700 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	MRPS9	P82933	396 aa	Known RBP	18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	GUCY1B3	Q02153	619 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	MTFR1	Q15390	333 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	CCDC144B	Q3MJ40	725 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	PRAMEF19	Q5SWL8	479 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	IFFO2	Q5TF58	517 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	TAPT1	Q6NXT6	567 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	KCNV1	Q6PIU1	500 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	NLRX1	Q86UT6	975 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	TNFRSF25	Q93038	417 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	ABHD8	Q96I13	439 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	CDHR1	Q96JP9	859 aa		18.2	■□□□□ 0.5
CCDC57-213	ENST00000581625	NKRF	O15226	690 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	FIBP	O43427	364 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	PDIA4	P13667	645 aa	Known RBP	18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	NR5A1	Q13285	461 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	GNL2	Q13823	731 aa	Known RBP	18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	TTLL4	Q14679	1199 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	LARP1B	Q659C4	914 aa	Known RBP	18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	IQSEC1	Q6DN90	963 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	OXER1	Q8TDS5	423 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	TBCK	Q8TEA7	893 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	GPRASP2	Q96D09	838 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	TMEM106C	Q9BVX2	250 aa		18.19	■□□□□ 0.5
CCDC57-213	ENST00000581625	BTBD18	B2RXH4	712 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	GJB1	P08034	283 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	TGFB3	P10600	412 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	RARB	P10826	455 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	ICAM3	P32942	547 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	ANP32A	P39687	249 aa	Known RBP	18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	ADCYAP1R1	P41586	468 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	USP11	P51784	963 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	SET	Q01105	290 aa	Predicted RBP	18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	MOXD1	Q6UVY6	613 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	PIK3AP1	Q6ZUJ8	805 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	NIPA1	Q7RTP0	329 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	NAP1L4	Q99733	375 aa	Known RBP	18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	UBIAD1	Q9Y5Z9	338 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	MRVI1	Q9Y6F6	885 aa		18.18	■□□□□ 0.5
CCDC57-213	ENST00000581625	MAFG	O15525	162 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	DUSP11	O75319	330 aa	Known RBP	18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	RGS20	O76081	388 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	MYC	P01106	439 aa	Predicted RBP	18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	CIITA	P33076	1130 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	ZNF76	P36508	570 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	TNFAIP2	Q03169	654 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	MTMR1	Q13613	665 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	CEP55	Q53EZ4	464 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	SEPT14	Q6ZU15	432 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	NEK8	Q86SG6	692 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	NOSTRIN	Q8IVI9	506 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	MXRA8	Q9BRK3	442 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	WDR11	Q9BZH6	1224 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	JADE2	Q9NQC1	790 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	PDGFC	Q9NRA1	345 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	FOXD4L1	Q9NU39	408 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625		Q9Y3F1	56 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	KIAA1217	Q5T5P2	1943 aa		18.17	■□□□□ 0.5
CCDC57-213	ENST00000581625	FRMPD3	Q5JV73	1810 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	TXN	P10599	105 aa	Known RBP	18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	GCFC2	P16383	781 aa	Known RBP	18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	ITGB5	P18084	799 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	U2AF2	P26368	475 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	GJA8	P48165	433 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	INF2	Q27J81	1249 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	DUSP28	Q4G0W2	176 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	DEFB118	Q96PH6	123 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	RTEL1	Q9NZ71	1219 aa		18.16	■□□□□ 0.5
CCDC57-213	ENST00000581625	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	SPATA31C2	B4DYI2	1134 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	SMPD1	P17405	629 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	SYT1	P21579	422 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	LHX8	Q68G74	356 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	CCDC62	Q6P9F0	684 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	TLK2	Q86UE8	772 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	U2AF1L4	Q8WU68	220 aa	Known RBP	18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	SPC25	Q9HBM1	224 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	XPNPEP3	Q9NQH7	507 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	GNE	Q9Y223	722 aa	Known RBP	18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	MYH7B	A7E2Y1	1941 aa		18.15	■□□□□ 0.5
CCDC57-213	ENST00000581625	IGLV3-22	A0A075B6J6	115 aa		18.14	■□□□□ 0.49
CCDC57-213	ENST00000581625	VPS37C	A5D8V6	355 aa	Predicted RBP	18.14	■□□□□ 0.49

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