RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
IFT20-210ENST00000580357 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
IFT20-210ENST00000580357 LCTP09848 1927 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 A0A1W2PQ45 241 aaPredicted RBP18.85■□□□□ 0.61
IFT20-210ENST00000580357 A0A1W2PQY0 241 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 SPDYE3A6NKU9 549 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 STXBP3O00186 592 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 CDKL5O76039 1030 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 ASGR1P07306 291 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 NEK4P51957 841 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 SSRP1Q08945 709 aaKnown RBP18.85■□□□□ 0.61
IFT20-210ENST00000580357 LRRC26Q2I0M4 334 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 GNPTABQ3T906 1256 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 CCDC62Q6P9F0 684 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 GPKOWQ92917 476 aaPredicted RBP eCLIP18.85■□□□□ 0.61
IFT20-210ENST00000580357 FERMT2Q96AC1 680 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 VTI1AQ96AJ9 217 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 STARD7Q9NQZ5 370 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 FRMPD3Q5JV73 1810 aa18.85■□□□□ 0.61
IFT20-210ENST00000580357 FRMPD4Q14CM0 1322 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 GH1P01241 217 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 GNA11P29992 359 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 ADCY7P51828 1080 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 ATN1P54259 1190 aaPredicted RBP18.84■□□□□ 0.61
IFT20-210ENST00000580357 SNX17Q15036 470 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 PCNX4Q63HM2 1172 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
IFT20-210ENST00000580357 SLC26A6Q9BXS9 759 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 SH3GLB2Q9NR46 395 aa18.84■□□□□ 0.61
IFT20-210ENST00000580357 ESYT2A0FGR8 921 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 CTAGE5O15320 804 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 PKN1Q16512 942 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 BICD2Q8TD16 824 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 C22orf23Q9BZE7 217 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 NCOA5Q9HCD5 579 aaKnown RBP18.83■□□□□ 0.6
IFT20-210ENST00000580357 DDX41Q9UJV9 622 aaKnown RBP18.83■□□□□ 0.6
IFT20-210ENST00000580357 PCDHA6Q9UN73 950 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 PCDHA8Q9Y5H6 950 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 MRVI1Q9Y6F6 885 aa18.83■□□□□ 0.6
IFT20-210ENST00000580357 MROH7Q68CQ1 1323 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 MYADML2A6NDP7 307 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 A6NJR5 290 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 H0YGN5 161 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 MAFGO15525 162 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 PFKFB2O60825 505 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 ICAM3P32942 547 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 AK2P54819 239 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 RTP1P59025 263 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 BEX3Q00994 111 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 STK3Q13188 491 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 AP3B2Q13367 1082 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 LY6KQ17RY6 165 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 NLRX1Q86UT6 975 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 DHX37Q8IY37 1157 aaKnown RBP18.82■□□□□ 0.6
IFT20-210ENST00000580357 C7orf61Q8IZ16 206 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 CCDC148Q8NFR7 591 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 PHKBQ93100 1093 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 TOX2Q96NM4 488 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
IFT20-210ENST00000580357 ZMYND12Q9H0C1 365 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 PRKAG2Q9UGJ0 569 aa18.82■□□□□ 0.6
IFT20-210ENST00000580357 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
IFT20-210ENST00000580357 DEXIO95424 95 aa18.81■□□□□ 0.6
IFT20-210ENST00000580357 RBM25P49756 843 aaKnown RBP18.81■□□□□ 0.6
IFT20-210ENST00000580357 EMID1Q96A84 441 aaPredicted RBP18.81■□□□□ 0.6
IFT20-210ENST00000580357 CDHR1Q96JP9 859 aa18.81■□□□□ 0.6
IFT20-210ENST00000580357 INPP4AQ96PE3 977 aaPredicted RBP18.81■□□□□ 0.6
IFT20-210ENST00000580357 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
IFT20-210ENST00000580357 COLQQ9Y215 455 aaPredicted RBP18.81■□□□□ 0.6
IFT20-210ENST00000580357 ATP11BQ9Y2G3 1177 aa18.81■□□□□ 0.6
IFT20-210ENST00000580357 DCDC2CA8MYV0 355 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 ARVCFO00192 962 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 FIBPO43427 364 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 RGS20O76081 388 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 ARIH2O95376 493 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 CDK7P50613 346 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 MRPS9P82933 396 aaKnown RBP18.8■□□□□ 0.6
IFT20-210ENST00000580357 NEDD9Q14511 834 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 UBE2SQ16763 222 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 TMEM63BQ5T3F8 832 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 GIMAP8Q8ND71 665 aaPredicted RBP18.8■□□□□ 0.6
IFT20-210ENST00000580357 IL31RAQ8NI17 732 aa18.8■□□□□ 0.6
IFT20-210ENST00000580357 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 XBP1P17861 261 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 CLK2P49760 499 aaKnown RBP18.79■□□□□ 0.6
IFT20-210ENST00000580357 IRX5P78411 483 aaPredicted RBP18.79■□□□□ 0.6
IFT20-210ENST00000580357 SCRN1Q12765 414 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 CELF3Q5SZQ8 465 aaKnown RBP18.79■□□□□ 0.6
IFT20-210ENST00000580357 TYW1BQ6NUM6 668 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 CXCL17Q6UXB2 119 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 ANKRD33Q7Z3H0 272 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 COPS5Q92905 334 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 GPRASP2Q96D09 838 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 SENP7Q9BQF6 1050 aa18.79■□□□□ 0.6
IFT20-210ENST00000580357 MTG1Q9BT17 334 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms