RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 FRMPD4Q14CM0 1322 aa21.48■■□□□ 1.03
PPP4R1-215ENST00000580182 CEP290O15078 2479 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 NKRFO15226 690 aaKnown RBP eCLIP21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 CCND2P30279 289 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 MRPS9P82933 396 aaKnown RBP21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 STK3Q13188 491 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 C1orf53Q5VUE5 145 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 VTI1AQ96AJ9 217 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 IL17RAQ96F46 866 aa21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 DDX41Q9UJV9 622 aaKnown RBP21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 COLQQ9Y215 455 aaPredicted RBP21.47■■□□□ 1.03
PPP4R1-215ENST00000580182 TLE2Q04725 743 aa21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 PKN1Q16512 942 aa21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 PFKFB3Q16875 520 aaPredicted RBP21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 ZNF274Q96GC6 653 aaPredicted RBP21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 BARHL2Q9NY43 387 aa21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 RTEL1Q9NZ71 1219 aa21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
PPP4R1-215ENST00000580182 PRPF3O43395 683 aaKnown RBP21.45■■□□□ 1.02
PPP4R1-215ENST00000580182 PQBP1O60828 265 aaKnown RBP21.45■■□□□ 1.02
PPP4R1-215ENST00000580182 EIF5BO60841 1220 aaKnown RBP21.45■■□□□ 1.02
PPP4R1-215ENST00000580182 SLC26A6Q9BXS9 759 aa21.45■■□□□ 1.02
PPP4R1-215ENST00000580182 ELP1O95163 1332 aa21.45■■□□□ 1.02
PPP4R1-215ENST00000580182 SMCO2A6NFE2 343 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 ZEB2O60315 1214 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 SORBS3O60504 671 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 MYL3P08590 195 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 SCG2P13521 617 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 IFNAR1P17181 557 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 AK2P54819 239 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 PSMC6P62333 389 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 ARHGAP1Q07960 439 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 SH3RF1Q7Z6J0 888 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 ALDH8A1Q9H2A2 487 aaPredicted RBP21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 RIC8AQ9NPQ8 531 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 TPCN1Q9ULQ1 816 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 PCDHA6Q9UN73 950 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 PCDHA8Q9Y5H6 950 aa21.44■■□□□ 1.02
PPP4R1-215ENST00000580182 A0A0U1RQG5 324 aaPredicted RBP21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 A6NJR5 290 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 hCG_1984214I3L0E3 225 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 ADAMTS3O15072 1205 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 GH1P01241 217 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 CPT1AP50416 773 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 CDK7P50613 346 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 ADCY7P51828 1080 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 SP2Q02086 613 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 ZNF713Q8N859 430 aaPredicted RBP21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 AFG1LQ8WV93 481 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 PGBD1Q96JS3 809 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 PRDM5Q9NQX1 630 aaPredicted RBP21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 PDLIM7Q9NR12 457 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 TMEM260Q9NX78 707 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 GRIN2DO15399 1336 aa21.43■■□□□ 1.02
PPP4R1-215ENST00000580182 TRIM43BA6NCK2 446 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 SPDYE3A6NKU9 549 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 ARVCFO00192 962 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 DTNBO60941 627 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 MAGEA10P43363 369 aaPredicted RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 PURAQ00577 322 aaKnown RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 AKAP17AQ02040 695 aaKnown RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 SEMA3FQ13275 785 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 PCNX4Q63HM2 1172 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 TRIM43Q96BQ3 446 aaPredicted RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 RNF26Q9BY78 433 aaPredicted RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 PRO3102Q9H379 93 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 BCAS3Q9H6U6 928 aa21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 RBM27Q9P2N5 1060 aaKnown RBP21.42■■□□□ 1.02
PPP4R1-215ENST00000580182 CABYRO75952 493 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 MDM2Q00987 491 aaPredicted RBP21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 FAAP100Q0VG06 881 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 SCRN1Q12765 414 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 ITGA7Q13683 1181 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 ANKRD33Q7Z3H0 272 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 PPP1R13LQ8WUF5 828 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 INPP4AQ96PE3 977 aaPredicted RBP21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 GDF15Q99988 308 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 POLR3EQ9NVU0 708 aa21.41■■□□□ 1.02
PPP4R1-215ENST00000580182 CPLX1O14810 134 aa21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 MMP3P08254 477 aa21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 CLTBP09497 229 aa21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 UBA1P22314 1058 aaKnown RBP21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 CLK2P49760 499 aaKnown RBP21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 NEK4P51957 841 aa21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 DHX37Q8IY37 1157 aaKnown RBP21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 SLC43A3Q8NBI5 491 aa21.4■■□□□ 1.02
PPP4R1-215ENST00000580182 MYH7BA7E2Y1 1941 aa21.39■■□□□ 1.02
PPP4R1-215ENST00000580182 SPATA31C2B4DYI2 1134 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 STAM2O75886 525 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 LARGE1O95461 756 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 GGPS1O95749 300 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 ITGB8P26012 769 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 ICAM3P32942 547 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 SSRP1Q08945 709 aaKnown RBP21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 BRDTQ58F21 947 aaPredicted RBP21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 CELF3Q5SZQ8 465 aaKnown RBP21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 MYSM1Q5VVJ2 828 aa21.39■■□□□ 1.01
PPP4R1-215ENST00000580182 KCNV1Q6PIU1 500 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms