RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 DIS3Q9Y2L1 958 aaKnown RBP12.18□□□□□ -0.46
SS18-213ENST00000579640 TBX3O15119 743 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 TRPA1O75762 1119 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 UBXN2AP68543 259 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 CNTN2Q02246 1040 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
SS18-213ENST00000579640 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
SS18-213ENST00000579640 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
SS18-213ENST00000579640 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 ASB14A6NK59 587 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 FAM86B1E9PN63 330 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 PRPF40AO75400 957 aaKnown RBP12.17□□□□□ -0.46
SS18-213ENST00000579640 TBC1D8O95759 1140 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 PGK2P07205 417 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 FAM86B2P0C5J1 330 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 MYCLP12524 364 aaPredicted RBP12.17□□□□□ -0.46
SS18-213ENST00000579640 EDNRBP24530 442 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 ME1P48163 572 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 FCGRTP55899 365 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 SP3Q02447 781 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 MAP2K1Q02750 393 aaPredicted RBP12.17□□□□□ -0.46
SS18-213ENST00000579640 KIF22Q14807 665 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 STXBP2Q15833 593 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 CALCRLQ16602 461 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 ZNF792Q3KQV3 632 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 PRR16Q569H4 304 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 MORN1Q5T089 497 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 NLRX1Q86UT6 975 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 KRI1Q8N9T8 703 aaKnown RBP12.17□□□□□ -0.46
SS18-213ENST00000579640 IL31RAQ8NI17 732 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
SS18-213ENST00000579640 SRPRBQ9Y5M8 271 aaKnown RBP12.17□□□□□ -0.46
SS18-213ENST00000579640 IGLV3-22A0A075B6J6 115 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MEIS1O00470 390 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 MAFGO15525 162 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 SLC37A4O43826 429 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 CUTAO60888 179 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 MRPS9P82933 396 aaKnown RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 PLA2G4DQ86XP0 818 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MORC4Q8TE76 937 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 LENG9Q96B70 501 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 KCNMB3Q9NPA1 279 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 JADE2Q9NQC1 790 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 PCDHA7Q9UN72 937 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MGAMO43451 1857 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 PLXNA1Q9UIW2 1896 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 ASTN1O14525 1302 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MARCH6O60337 910 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 COBLO75128 1261 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 HOXC6P09630 235 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 UBE2HP62256 183 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 PDE4DQ08499 809 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 GNPTABQ3T906 1256 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 MSL3Q8N5Y2 521 aaKnown RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 ZNF579Q8NAF0 562 aaKnown RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 GPRASP2Q96D09 838 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 CDHR1Q96JP9 859 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 FGD4Q96M96 766 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 FAM20AQ96MK3 541 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 LMBRD1Q9NUN5 540 aa12.16□□□□□ -0.46
SS18-213ENST00000579640 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
SS18-213ENST00000579640 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 ITGB5P18084 799 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 RGS2P41220 211 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
SS18-213ENST00000579640 RAB34Q9BZG1 259 aa12.15□□□□□ -0.46
SS18-213ENST00000579640 GPR25O00155 361 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
SS18-213ENST00000579640 PSMC4P43686 418 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
SS18-213ENST00000579640 MTMR1Q13613 665 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
SS18-213ENST00000579640 MAMDC4Q6UXC1 1216 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 USP6NLQ92738 828 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 HAS1Q92839 578 aa12.14□□□□□ -0.47
SS18-213ENST00000579640 LRRC37A2A6NM11 1700 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms