RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 ICAM1P05362 532 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GTF2F1P35269 517 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TDO2P48775 406 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 VCPP55072 806 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZXDAP98168 799 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TFAP4Q01664 338 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 HYAL1Q12794 435 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 MBTPS1Q14703 1052 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZSCAN25Q6NSZ9 544 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 NEDD1Q8NHV4 660 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 KAT2BQ92831 832 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 WNT8BQ93098 351 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 HAUS7Q99871 368 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TLR9Q9NR96 1032 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 LINC01565O15544 149 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SLC16A2P36021 539 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZNF200P98182 395 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RBL2Q08999 1139 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SMAD4Q13485 552 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 LY6KQ17RY6 165 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CTC1Q2NKJ3 1217 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SESTD1Q86VW0 696 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 KIF1BPQ96EK5 621 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GTF2IRD1Q9UHL9 959 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CD207Q9UJ71 328 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 STX8Q9UNK0 236 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SCN10AQ9Y5Y9 1956 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TRIOO75962 3097 aa15.62■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TECTAO75443 2155 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 PLA2G6O60733 806 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 MMP3P08254 477 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ATP5JP18859 108 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CTNNB1P35222 781 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 PSEN2P49810 448 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 PTK7Q13308 1070 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TTBK2Q6IQ55 1244 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GIMAP6Q6P9H5 292 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TRAF7Q6Q0C0 670 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RNF207Q6ZRF8 634 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ASCL5Q7RTU5 278 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 MPHOSPH6Q99547 160 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 IRF2BPLQ9H1B7 796 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ALG13Q9NP73 1137 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SIP14410 1827 aa15.61■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GREB1LQ9C091 1923 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GRM6O15303 877 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TBX10O75333 385 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 AVPR2P30518 371 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TRIM71Q2Q1W2 868 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SEPT14Q6ZU15 432 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 EPB41L4AQ9HCS5 686 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TRIP12Q14669 1992 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZDBF2Q9HCK1 2354 aa15.6■□□□□ 0.09
CDK5RAP3-213ENST00000579605 C5orf42Q9H799 3197 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 GH1P01241 217 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RLBP1P12271 317 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 THPOP40225 353 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 NDUFV1P49821 464 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RPS6P62753 249 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TOP1MTQ969P6 601 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ID4P47928 161 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ARHGAP1Q07960 439 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MFSD10Q14728 455 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 KIAA0753Q2KHM9 967 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ERMP1Q7Z2K6 904 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 DHX37Q8IY37 1157 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 FIBCD1Q8N539 461 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 CLEC4DQ8WXI8 215 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 OSBP2Q969R2 916 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 IFIH1Q9BYX4 1025 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 INCENPQ9NQS7 918 aa15.58■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MYH4Q9Y623 1939 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 B4DLN1 442 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 NMT2O60551 498 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 KDM4AO75164 1064 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 ZNF286BP0CG31 522 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 EDNRBP24530 442 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 MRPL12P52815 198 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SIGLEC14Q08ET2 396 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 DGKDQ16760 1214 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 PLEKHG4Q58EX7 1191 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SYDE2Q5VT97 1194 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 SEPT8Q92599 483 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 RPGRIP1Q96KN7 1286 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 FSD1Q9BTV5 496 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 GPCPD1Q9NPB8 672 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 EMSYQ7Z589 1322 aa15.57■□□□□ 0.08
CDK5RAP3-213ENST00000579605 LOC730098B7Z3J9 87 aa15.56■□□□□ 0.08
CDK5RAP3-213ENST00000579605 GPAA1O43292 621 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms