RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 SELPP16109 830 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 TCTN1Q2MV58 587 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 C7orf31Q8N865 590 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 CAGE1Q8TC20 777 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 SYTL5Q8TDW5 730 aaPredicted RBP11.26□□□□□ -0.61
MSI2-208ENST00000579466 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 KAT2BQ92831 832 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 HLA-CQ95604 372 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 CTAGE1Q96RT6 745 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 COG5Q9UP83 839 aa11.26□□□□□ -0.61
MSI2-208ENST00000579466 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 MICAL3Q7RTP6 2002 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 NBNO60934 754 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 KDM4AO75164 1064 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 CFBP00751 764 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 POU3F3P20264 500 aaPredicted RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 GPNMBQ14956 572 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 ESR2Q92731 530 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 KHSRPQ92945 711 aaKnown RBP eCLIP11.25□□□□□ -0.61
MSI2-208ENST00000579466 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 LNPKQ9C0E8 428 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
MSI2-208ENST00000579466 KAT14Q9H8E8 782 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 ABCB11O95342 1321 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 ZMYM6O95789 1325 aa11.25□□□□□ -0.61
MSI2-208ENST00000579466 B4E1Z4 1266 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 CKBP12277 381 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
MSI2-208ENST00000579466 PSEN2P49810 448 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 MFSD10Q14728 455 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 STXBP2Q15833 593 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 DGKDQ16760 1214 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 KIAA0753Q2KHM9 967 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 CNKSR3Q6P9H4 555 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
MSI2-208ENST00000579466 WNT8BQ93098 351 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
MSI2-208ENST00000579466 TTC14Q96N46 770 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 LRFN3Q9BTN0 628 aa11.24□□□□□ -0.61
MSI2-208ENST00000579466 NLRC5Q86WI3 1866 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 ZNF213O14771 459 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
MSI2-208ENST00000579466 ZNF618Q5T7W0 954 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
MSI2-208ENST00000579466 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 FBXO11Q86XK2 927 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 MYOCDQ8IZQ8 938 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 PXMP2Q9NR77 195 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 DDX41Q9UJV9 622 aaKnown RBP11.23□□□□□ -0.61
MSI2-208ENST00000579466 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
MSI2-208ENST00000579466 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
MSI2-208ENST00000579466 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 GJB5O95377 273 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 NR3C2P08235 984 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 PCP11498 1178 aaKnown RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 KCNA5P22460 613 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 HOXA13P31271 388 aaPredicted RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 MBTPS1Q14703 1052 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 ASPRV1Q53RT3 343 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 TMEM31Q5JXX7 168 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSI2-208ENST00000579466 SESTD1Q86VW0 696 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 DGKHQ86XP1 1220 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 RGS22Q8NE09 1264 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 TGS1Q96RS0 853 aaKnown RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 ZSCAN10Q96SZ4 725 aaPredicted RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
MSI2-208ENST00000579466 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
MSI2-208ENST00000579466 GGPS1O95749 300 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 F2P00734 622 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 CXCL10P02778 98 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 CTSHP09668 335 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 SDSP20132 328 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 SSTR3P32745 418 aaPredicted RBP11.21□□□□□ -0.61
MSI2-208ENST00000579466 THPOP40225 353 aa11.21□□□□□ -0.61
MSI2-208ENST00000579466 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
MSI2-208ENST00000579466 PTK7Q13308 1070 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms