RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, human

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCE1-215	ENST00000578995	HHIPL1	Q96JK4	782 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CLMN	Q96JQ2	1002 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	LSG1	Q9H089	658 aa	Known RBP	4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	VEZT	Q9HBM0	779 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	ATP8A2	Q9NTI2	1148 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	ANAPC4	Q9UJX5	808 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	PALD1	Q9ULE6	856 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	ZNF232	Q9UNY5	417 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	SNCAIP	Q9Y6H5	919 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	MYH15	Q9Y2K3	1946 aa		4.54	□□□□□ -1.68
SMARCE1-215	ENST00000578995	IGKV6D-41	A0A0C4DH26	115 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	HMX2	A2RU54	273 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	TMEM88B	A6NKF7	163 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	PATL2	C9JE40	543 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	USP17L12	C9JPN9	530 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	USP17L21	D6R901	530 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CDC45	O75419	566 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CELF2	O95319	508 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	FGA	P02671	866 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	HSPA6	P17066	643 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	RASA1	P20936	1047 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	INPP5B	P32019	993 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	TNNI2	P48788	182 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	FKBP1B	P68106	108 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	PLCB2	Q00722	1185 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	VGLL4	Q14135	290 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	C8orf34	Q49A92	452 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CWC27	Q6UX04	472 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	STOX1	Q6ZVD7	989 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	C16orf86	Q6ZW13	317 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	RASAL3	Q86YV0	1011 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	SIAH1	Q8IUQ4	282 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	TBC1D10C	Q8IV04	446 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	MAP4K3	Q8IVH8	894 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	MAP4K1	Q92918	833 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	KCNB2	Q92953	911 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	IL17RA	Q96F46	866 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	DYNLL2	Q96FJ2	89 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CSRNP1	Q96S65	589 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	DSCC1	Q9BVC3	393 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	DHX36	Q9H2U1	1008 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	GBA2	Q9HCG7	927 aa	Predicted RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	TMOD2	Q9NZR1	351 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	CCDC39	Q9UFE4	941 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	SAP30BP	Q9UHR5	308 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	HERC5	Q9UII4	1024 aa	Known RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	SLC4A4	Q9Y6R1	1079 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	HTT	P42858	3142 aa		4.53	□□□□□ -1.68
SMARCE1-215	ENST00000578995	KIAA1217	Q5T5P2	1943 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	NEDD4	P46934	1319 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	UNCX	A6NJT0	531 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	UBE2Q2L	H0YL09	131 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	HIP1	O00291	1037 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ORC4	O43929	436 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	CYP21A2	P08686	494 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	GNAT2	P19087	354 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	CAP2	P40123	477 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	NECTIN1	Q15223	517 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	SLC4A8	Q2Y0W8	1093 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	SUPT20HL1	Q3ZLR7	823 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	PERM1	Q5SV97	790 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	C1orf53	Q5VUE5	145 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	MIGA2	Q7L4E1	593 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	CCDC84	Q86UT8	332 aa	Predicted RBP	4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	HSH2D	Q96JZ2	352 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ZNF341	Q9BYN7	854 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	INCENP	Q9NQS7	918 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	DIAPH3	Q9NSV4	1193 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	MCM9	Q9NXL9	1143 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	PI4KB	Q9UBF8	816 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	SERPINB13	Q9UIV8	391 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ZBTB21	Q9ULJ3	1066 aa		4.52	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ADGRA2	Q96PE1	1338 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	MYH7B	A7E2Y1	1941 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995		A0A1W2PRG0	241 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	SERTM1	A2A2V5	107 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	AKR1B1	P15121	316 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	PTPRA	P18433	802 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	BUD31	P41223	144 aa	Predicted RBP	4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	USP5	P45974	858 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	CDK8	P49336	464 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ANTXR2	P58335	489 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	PPARA	Q07869	468 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	DGKZ	Q13574	1117 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	KIAA1755	Q5JYT7	1200 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	RCSD1	Q6JBY9	416 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	VSIG10L	Q86VR7	867 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	CLEC10A	Q8IUN9	316 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	KSR1	Q8IVT5	923 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	ANKRD13A	Q8IZ07	590 aa		4.51	□□□□□ -1.69
SMARCE1-215	ENST00000578995	SCYL3	Q8IZE3	742 aa		4.51	□□□□□ -1.69

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