RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 MTUS1Q9ULD2 1270 aa11.71□□□□□ -0.53
CUEDC1-208ENST00000578357 LINC01553A4QN01 128 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 NBNO60934 754 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 ALADP13716 330 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 DEFB103AP81534 67 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 PTK7Q13308 1070 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 LEXMQ3ZCV2 418 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 USH1GQ495M9 461 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 MFSD6Q6ZSS7 791 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 SPRED2Q7Z698 418 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 FAM178BQ8IXR5 827 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 GJD3Q8N144 294 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 KAT2BQ92831 832 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 KATNAL1Q9BW62 490 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 CD320Q9NPF0 282 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 C11orf16Q9NQ32 467 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 GTF2IRD1Q9UHL9 959 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 INSL6Q9Y581 213 aa11.7□□□□□ -0.54
CUEDC1-208ENST00000578357 PIEZO1Q92508 2521 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 LRRC37A2A6NM11 1700 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 FAM86C2PA6NEL3 165 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 PRR33A8MZF0 331 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 KCNA5P22460 613 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 PDE1AP54750 535 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 ARHGAP1Q07960 439 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 MCMDC2Q4G0Z9 681 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 DHX38Q92620 1227 aaKnown RBP11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 TAAR1Q96RJ0 339 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 RMDN3Q96TC7 470 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 HDAC6Q9UBN7 1215 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
CUEDC1-208ENST00000578357 ABCB11O95342 1321 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 PPFIA4O75335 1185 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 AMHP03971 560 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 PSEN2P49810 448 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 MFSD10Q14728 455 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 PTPROQ16827 1216 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 CCDC178Q5BJE1 867 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 ZNF618Q5T7W0 954 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 ARHGEF16Q5VV41 709 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 FAM117BQ6P1L5 589 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 DGKHQ86XP1 1220 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 DHX37Q8IY37 1157 aaKnown RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 SYTL5Q8TDW5 730 aaPredicted RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 EMID1Q96A84 441 aaPredicted RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 FAM227BQ96M60 508 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 UBA5Q9GZZ9 404 aa11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 RNF41Q9H4P4 317 aaPredicted RBP11.68□□□□□ -0.54
CUEDC1-208ENST00000578357 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 LGR5O75473 907 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 HSPD1P10809 573 aaKnown RBP11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 PDE4AP27815 886 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 NT5C2P49902 561 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 CDC37Q16543 378 aaPredicted RBP11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 KCNV1Q6PIU1 500 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 FBXO22Q8NEZ5 403 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 PPTC7Q8NI37 304 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 ESR2Q92731 530 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 MRPL38Q96DV4 380 aaKnown RBP11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
CUEDC1-208ENST00000578357 TET1Q8NFU7 2136 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 GRXCR2A6NFK2 248 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 RSPH10B2B2RC85 870 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 HAS3O00219 553 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 NR3C2P08235 984 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 RSPH10BP0C881 870 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 HAND2P61296 217 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 TRIM71Q2Q1W2 868 aaKnown RBP11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 ALYREFQ86V81 257 aaKnown RBP11.66□□□□□ -0.54
CUEDC1-208ENST00000578357 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms