RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SNX17Q15036 470 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 PKN1Q16512 942 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 PHKBQ93100 1093 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 RIC8AQ9NPQ8 531 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 H0YGN5 161 aa26.55■■□□□ 1.84
LIMD2-204ENST00000578297 AK2P54819 239 aa26.55■■□□□ 1.84
LIMD2-204ENST00000578297 AKAP17AQ02040 695 aaKnown RBP26.55■■□□□ 1.84
LIMD2-204ENST00000578297 C7orf61Q8IZ16 206 aa26.55■■□□□ 1.84
LIMD2-204ENST00000578297 ZEB2O60315 1214 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 STAM2O75886 525 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 RGS20O76081 388 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 STK3Q13188 491 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 UBE2SQ16763 222 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 OR6J1Q8NGC5 347 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 GLT1D1Q96MS3 346 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 SLC26A6Q9BXS9 759 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 GLT8D2Q9H1C3 349 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 TPCN1Q9ULQ1 816 aa26.54■■□□□ 1.84
LIMD2-204ENST00000578297 SMCO2A6NFE2 343 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 CPLX1O14810 134 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 ADCY7P51828 1080 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 NEK4P51957 841 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 RTP1P59025 263 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 LY6KQ17RY6 165 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 PCNX4Q63HM2 1172 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 XRRA1Q6P2D8 792 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 KCNV1Q6PIU1 500 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 COPS5Q92905 334 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 STARD7Q9NQZ5 370 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 DDX41Q9UJV9 622 aaKnown RBP26.53■■□□□ 1.84
LIMD2-204ENST00000578297 ELP1O95163 1332 aa26.53■■□□□ 1.84
LIMD2-204ENST00000578297 SPDYE3A6NKU9 549 aa26.52■■□□□ 1.84
LIMD2-204ENST00000578297 CPT1AP50416 773 aa26.52■■□□□ 1.84
LIMD2-204ENST00000578297 MRPS9P82933 396 aaKnown RBP26.52■■□□□ 1.84
LIMD2-204ENST00000578297 CPLX2Q6PUV4 134 aaKnown RBP26.52■■□□□ 1.84
LIMD2-204ENST00000578297 SLKQ9H2G2 1235 aaPredicted RBP26.52■■□□□ 1.84
LIMD2-204ENST00000578297 PCDHA6Q9UN73 950 aa26.52■■□□□ 1.84
LIMD2-204ENST00000578297 PCDHA8Q9Y5H6 950 aa26.52■■□□□ 1.84
LIMD2-204ENST00000578297 MRVI1Q9Y6F6 885 aa26.52■■□□□ 1.84
LIMD2-204ENST00000578297 ESYT2A0FGR8 921 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 PFKFB2O60825 505 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 PPFIA3O75145 1194 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 CABYRO75952 493 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 GH1P01241 217 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 TGFB3P10600 412 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 SSRP1Q08945 709 aaKnown RBP26.51■■□□□ 1.83
LIMD2-204ENST00000578297 SCRN1Q12765 414 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 TRIM22Q8IYM9 498 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 CCDC12Q8WUD4 166 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-204ENST00000578297 INPP4AQ96PE3 977 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-204ENST00000578297 C22orf23Q9BZE7 217 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 GTF3C3Q9Y5Q9 886 aa26.51■■□□□ 1.83
LIMD2-204ENST00000578297 A6NJR5 290 aa26.5■■□□□ 1.83
LIMD2-204ENST00000578297 TRIM60Q495X7 471 aa26.5■■□□□ 1.83
LIMD2-204ENST00000578297 BRDTQ58F21 947 aaPredicted RBP26.5■■□□□ 1.83
LIMD2-204ENST00000578297 ZFP91Q96JP5 570 aaPredicted RBP26.5■■□□□ 1.83
LIMD2-204ENST00000578297 ZMYND12Q9H0C1 365 aa26.5■■□□□ 1.83
LIMD2-204ENST00000578297 ATP11BQ9Y2G3 1177 aa26.5■■□□□ 1.83
LIMD2-204ENST00000578297 FOSP01100 380 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-204ENST00000578297 RBM25P49756 843 aaKnown RBP26.49■■□□□ 1.83
LIMD2-204ENST00000578297 CLK2P49760 499 aaKnown RBP26.49■■□□□ 1.83
LIMD2-204ENST00000578297 ARHGAP1Q07960 439 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 GNPTABQ3T906 1256 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 CXCL17Q6UXB2 119 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 EMID1Q96A84 441 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-204ENST00000578297 VTI1AQ96AJ9 217 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 EHMT1Q9H9B1 1298 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 POLR3EQ9NVU0 708 aa26.49■■□□□ 1.83
LIMD2-204ENST00000578297 ICAM3P32942 547 aa26.48■■□□□ 1.83
LIMD2-204ENST00000578297 KIF2CQ99661 725 aa26.48■■□□□ 1.83
LIMD2-204ENST00000578297 C6orf50Q9HD87 102 aa26.48■■□□□ 1.83
LIMD2-204ENST00000578297 RTEL1Q9NZ71 1219 aa26.48■■□□□ 1.83
LIMD2-204ENST00000578297 CEP290O15078 2479 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 A0A0U1RQG5 324 aaPredicted RBP26.47■■□□□ 1.83
LIMD2-204ENST00000578297 KPNA6O60684 536 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 CDKL5O76039 1030 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 DEXIO95424 95 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 AP3B2Q13367 1082 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 SH3GLB2Q9NR46 395 aa26.47■■□□□ 1.83
LIMD2-204ENST00000578297 SPATA31C2B4DYI2 1134 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 GNA11P29992 359 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 CDK7P50613 346 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 PURAQ00577 322 aaKnown RBP26.46■■□□□ 1.83
LIMD2-204ENST00000578297 TLE2Q04725 743 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 LAMC2Q13753 1193 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 ME3Q16798 604 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 ANKRD33Q7Z3H0 272 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 DHX37Q8IY37 1157 aaKnown RBP26.46■■□□□ 1.83
LIMD2-204ENST00000578297 CCDC148Q8NFR7 591 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 AFG1LQ8WV93 481 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 TOX2Q96NM4 488 aa26.46■■□□□ 1.83
LIMD2-204ENST00000578297 ZMYND8Q9ULU4 1186 aaPredicted RBP26.46■■□□□ 1.83
LIMD2-204ENST00000578297 ARVCFO00192 962 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 FIBPO43427 364 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 SYN1P17600 705 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 SP2Q02086 613 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 CELF3Q5SZQ8 465 aaKnown RBP26.45■■□□□ 1.82
LIMD2-204ENST00000578297 MYSM1Q5VVJ2 828 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 MCTP2Q6DN12 878 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 NLRX1Q86UT6 975 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms