RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 PHKBQ93100 1093 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 TMEM39AQ9NV64 488 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 POLR3EQ9NVU0 708 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 Q9Y3F1 56 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 FRMPD3Q5JV73 1810 aa10.61□□□□□ -0.71
CDKN2A-211ENST00000577854 ELP1O95163 1332 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 MROH7Q68CQ1 1323 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 CLTBP09497 229 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 SCG2P13521 617 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 RAG1P15918 1043 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 PDIA3P30101 505 aaKnown RBP10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 SP4Q02446 784 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 ITGA7Q13683 1181 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 TOB2Q14106 344 aaPredicted RBP10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 CCDC12Q8WUD4 166 aaPredicted RBP10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 AFG1LQ8WV93 481 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 PGBD1Q96JS3 809 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 TM6SF1Q9BZW5 370 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 SLKQ9H2G2 1235 aaPredicted RBP10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 MLXIPQ9HAP2 919 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 RBM27Q9P2N5 1060 aaKnown RBP10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
CDKN2A-211ENST00000577854 MCM3APO60318 1980 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 RBM47A0AV96 593 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 SMCO2A6NFE2 343 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 hCG_1984214I3L0E3 225 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 STXBP3O00186 592 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 ARVCFO00192 962 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 NOP56O00567 594 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 MEIS2O14770 477 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 CTAGE5O15320 804 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 GGPS1O95749 300 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 ANAPC15P60006 121 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 GHRHRQ02643 423 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 SSRP1Q08945 709 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PFKFB3Q16875 520 aaPredicted RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 HABP4Q5JVS0 413 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 KCNV1Q6PIU1 500 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 ZNF713Q8N859 430 aaPredicted RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PPP1R13LQ8WUF5 828 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 MTG1Q9BT17 334 aaPredicted RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 UPF2Q9HAU5 1272 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 C6orf50Q9HD87 102 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PDLIM7Q9NR12 457 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PCDHA6Q9UN73 950 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 NOD1Q9Y239 953 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 PCDHA8Q9Y5H6 950 aa10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
CDKN2A-211ENST00000577854 LRRC37A2A6NM11 1700 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 MYH6P13533 1939 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 SEC24BO95487 1268 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 UBA1P22314 1058 aaKnown RBP10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 ZNF76P36508 570 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 NEK4P51957 841 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 FUT2Q10981 343 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 SNX17Q15036 470 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 ANKRD1Q15327 319 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 DGKDQ16760 1214 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 JAKMIP3Q5VZ66 844 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 CCDC148Q8NFR7 591 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 BADQ92934 168 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 PPP1R12CQ9BZL4 782 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 RIC8AQ9NPQ8 531 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 TMEM260Q9NX78 707 aa10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 DDX41Q9UJV9 622 aaKnown RBP10.58□□□□□ -0.72
CDKN2A-211ENST00000577854 LCTP09848 1927 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 TRIM43BA6NCK2 446 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 A6NJR5 290 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 PRPF3O43395 683 aaKnown RBP10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 FIBPO43427 364 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 KPNA6O60684 536 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 STAM2O75886 525 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 CDKL5O76039 1030 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 RGS20O76081 388 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 MMP3P08254 477 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 ZNF286BP0CG31 522 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 AK2P54819 239 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 NLRP5P59047 1200 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 PURAQ00577 322 aaKnown RBP10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 ARHGAP1Q07960 439 aa10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
CDKN2A-211ENST00000577854 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms