RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 AKAP17AQ02040 695 aaKnown RBP27.01■■□□□ 1.91
SNF8-217ENST00000576353 CXCL17Q6UXB2 119 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 IL31RAQ8NI17 732 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 IL17RAQ96F46 866 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 POLR3EQ9NVU0 708 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 BARHL2Q9NY43 387 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 MRVI1Q9Y6F6 885 aa27.01■■□□□ 1.91
SNF8-217ENST00000576353 A0A0U1RQG5 324 aaPredicted RBP27■■□□□ 1.91
SNF8-217ENST00000576353 PRPF3O43395 683 aaKnown RBP27■■□□□ 1.91
SNF8-217ENST00000576353 SEC24BO95487 1268 aa27■■□□□ 1.91
SNF8-217ENST00000576353 GH1P01241 217 aa27■■□□□ 1.91
SNF8-217ENST00000576353 TLE2Q04725 743 aa27■■□□□ 1.91
SNF8-217ENST00000576353 PFKFB3Q16875 520 aaPredicted RBP27■■□□□ 1.91
SNF8-217ENST00000576353 LY6KQ17RY6 165 aa27■■□□□ 1.91
SNF8-217ENST00000576353 XRRA1Q6P2D8 792 aa27■■□□□ 1.91
SNF8-217ENST00000576353 COPS5Q92905 334 aa27■■□□□ 1.91
SNF8-217ENST00000576353 GLT8D2Q9H1C3 349 aa27■■□□□ 1.91
SNF8-217ENST00000576353 ALDH8A1Q9H2A2 487 aaPredicted RBP27■■□□□ 1.91
SNF8-217ENST00000576353 DDX41Q9UJV9 622 aaKnown RBP27■■□□□ 1.91
SNF8-217ENST00000576353 ALPK3Q96L96 1907 aa27■■□□□ 1.91
SNF8-217ENST00000576353 KPNA6O60684 536 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 TGFB3P10600 412 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 CCT2P78371 535 aaKnown RBP26.99■■□□□ 1.91
SNF8-217ENST00000576353 GNPTABQ3T906 1256 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 CHRDL2Q6WN34 429 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 ANKRD33Q7Z3H0 272 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 TOX2Q96NM4 488 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 SEZ6LQ9BYH1 1024 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 RIC8AQ9NPQ8 531 aa26.99■■□□□ 1.91
SNF8-217ENST00000576353 COLQQ9Y215 455 aaPredicted RBP26.99■■□□□ 1.91
SNF8-217ENST00000576353 MROH7Q68CQ1 1323 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 A6NJR5 290 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 SPDYE3A6NKU9 549 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 STXBP3O00186 592 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 RGS20O76081 388 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 SCG2P13521 617 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 IFNAR1P17181 557 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 ANKRD1Q15327 319 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 NTRK3Q16288 839 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 PCNX4Q63HM2 1172 aa26.98■■□□□ 1.91
SNF8-217ENST00000576353 RNF26Q9BY78 433 aaPredicted RBP26.98■■□□□ 1.91
SNF8-217ENST00000576353 DCDC2CA8MYV0 355 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 ARVCFO00192 962 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 PQBP1O60828 265 aaKnown RBP26.97■■□□□ 1.91
SNF8-217ENST00000576353 CDK7P50613 346 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 ADCY7P51828 1080 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 UBE2SQ16763 222 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 TYW1BQ6NUM6 668 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 LARP6Q9BRS8 491 aaKnown RBP26.97■■□□□ 1.91
SNF8-217ENST00000576353 EHMT1Q9H9B1 1298 aa26.97■■□□□ 1.91
SNF8-217ENST00000576353 NCOA5Q9HCD5 579 aaKnown RBP26.97■■□□□ 1.91
SNF8-217ENST00000576353 SMCO2A6NFE2 343 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 CPLX1O14810 134 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 MYL3P08590 195 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 MRPS9P82933 396 aaKnown RBP26.96■■□□□ 1.91
SNF8-217ENST00000576353 ARHGAP1Q07960 439 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 LAMC2Q13753 1193 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 CPLX2Q6PUV4 134 aaKnown RBP26.96■■□□□ 1.91
SNF8-217ENST00000576353 CCDC12Q8WUD4 166 aaPredicted RBP26.96■■□□□ 1.91
SNF8-217ENST00000576353 PHKBQ93100 1093 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 EMID1Q96A84 441 aaPredicted RBP26.96■■□□□ 1.91
SNF8-217ENST00000576353 PCDHA6Q9UN73 950 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 PCDHA8Q9Y5H6 950 aa26.96■■□□□ 1.91
SNF8-217ENST00000576353 FOSP01100 380 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 CLTBP09497 229 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 PURAQ00577 322 aaKnown RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 ITGA7Q13683 1181 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 C8orf34Q49A92 452 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 DHX37Q8IY37 1157 aaKnown RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 TRIM22Q8IYM9 498 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 ZFP91Q96JP5 570 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 INPP4AQ96PE3 977 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 GDF15Q99988 308 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 LBHD1Q9BQE6 289 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 MTG1Q9BT17 334 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 SLC26A6Q9BXS9 759 aa26.95■■□□□ 1.9
SNF8-217ENST00000576353 PRDM5Q9NQX1 630 aaPredicted RBP26.95■■□□□ 1.9
SNF8-217ENST00000576353 MAGEA10P43363 369 aaPredicted RBP26.94■■□□□ 1.9
SNF8-217ENST00000576353 PKN1Q16512 942 aa26.94■■□□□ 1.9
SNF8-217ENST00000576353 SLC43A3Q8NBI5 491 aa26.94■■□□□ 1.9
SNF8-217ENST00000576353 AFG1LQ8WV93 481 aa26.94■■□□□ 1.9
SNF8-217ENST00000576353 PDLIM7Q9NR12 457 aa26.94■■□□□ 1.9
SNF8-217ENST00000576353 RTEL1Q9NZ71 1219 aa26.94■■□□□ 1.9
SNF8-217ENST00000576353 ICAM3P32942 547 aa26.93■■□□□ 1.9
SNF8-217ENST00000576353 STK3Q13188 491 aa26.93■■□□□ 1.9
SNF8-217ENST00000576353 NLRX1Q86UT6 975 aa26.93■■□□□ 1.9
SNF8-217ENST00000576353 PRO3102Q9H379 93 aa26.93■■□□□ 1.9
SNF8-217ENST00000576353 ESYT2A0FGR8 921 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 SPATA31C2B4DYI2 1134 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 TLR3O15455 904 aaKnown RBP26.92■■□□□ 1.9
SNF8-217ENST00000576353 FIBPO43427 364 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 BMP8BP34820 402 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 SSRP1Q08945 709 aaKnown RBP26.92■■□□□ 1.9
SNF8-217ENST00000576353 FAAP100Q0VG06 881 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 CELF3Q5SZQ8 465 aaKnown RBP26.92■■□□□ 1.9
SNF8-217ENST00000576353 SLKQ9H2G2 1235 aaPredicted RBP26.92■■□□□ 1.9
SNF8-217ENST00000576353 C6orf50Q9HD87 102 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 TMEM39AQ9NV64 488 aa26.92■■□□□ 1.9
SNF8-217ENST00000576353 MMP3P08254 477 aa26.91■■□□□ 1.9
SNF8-217ENST00000576353 AK2P54819 239 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms