RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 UBE2OQ9C0C9 1292 aaKnown RBP17.54■□□□□ 0.4
SMG6-220ENST00000576218 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 CPLX1O14810 134 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 ARIH2O95376 493 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
SMG6-220ENST00000576218 ADCY7P51828 1080 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
SMG6-220ENST00000576218 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 PPP1R18Q6NYC8 613 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
SMG6-220ENST00000576218 TMEM39AQ9NV64 488 aa17.53■□□□□ 0.4
SMG6-220ENST00000576218 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
SMG6-220ENST00000576218 ARVCFO00192 962 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 PIK3CDO00329 1044 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 CTAGE5O15320 804 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 NKX3-2P78367 333 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 CCT2P78371 535 aaKnown RBP17.52■□□□□ 0.4
SMG6-220ENST00000576218 ITGA7Q13683 1181 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 UBE2SQ16763 222 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 CPLX2Q6PUV4 134 aaKnown RBP17.52■□□□□ 0.4
SMG6-220ENST00000576218 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.4
SMG6-220ENST00000576218 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 ZFP91Q96JP5 570 aaPredicted RBP17.52■□□□□ 0.4
SMG6-220ENST00000576218 MTG1Q9BT17 334 aaPredicted RBP17.52■□□□□ 0.4
SMG6-220ENST00000576218 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.4
SMG6-220ENST00000576218 MEIS2O14770 477 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 SORBS3O60504 671 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 KPNA6O60684 536 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 STAM2O75886 525 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 RAG1P15918 1043 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 ANAPC15P60006 121 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 PSMC6P62333 389 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 STK3Q13188 491 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 CCDC12Q8WUD4 166 aaPredicted RBP17.51■□□□□ 0.39
SMG6-220ENST00000576218 SLC26A6Q9BXS9 759 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 GLT8D2Q9H1C3 349 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
SMG6-220ENST00000576218 SMCO2A6NFE2 343 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 PDIA3P30101 505 aaKnown RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 LAMC2Q13753 1193 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 TOB2Q14106 344 aaPredicted RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 CCDC62Q6P9F0 684 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 ANKRD33Q7Z3H0 272 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 NLRX1Q86UT6 975 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 AFG1LQ8WV93 481 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 PHKBQ93100 1093 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 TOX2Q96NM4 488 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 SEZ6LQ9BYH1 1024 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 AGXT2Q9BYV1 514 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 MLXIPQ9HAP2 919 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
SMG6-220ENST00000576218 DDX41Q9UJV9 622 aaKnown RBP17.5■□□□□ 0.39
SMG6-220ENST00000576218 STXBP3O00186 592 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 NOP56O00567 594 aaKnown RBP17.49■□□□□ 0.39
SMG6-220ENST00000576218 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 GGPS1O95749 300 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 MMP3P08254 477 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 SCG2P13521 617 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 PURAQ00577 322 aaKnown RBP17.49■□□□□ 0.39
SMG6-220ENST00000576218 FUT2Q10981 343 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 DGKDQ16760 1214 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
SMG6-220ENST00000576218 PCNX4Q63HM2 1172 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 XRRA1Q6P2D8 792 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 SH3RF1Q7Z6J0 888 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 GDF15Q99988 308 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 RIC8AQ9NPQ8 531 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 NID2Q14112 1375 aa17.49■□□□□ 0.39
SMG6-220ENST00000576218 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 A6NJR5 290 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 FIBPO43427 364 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 TGFB3P10600 412 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 UBA1P22314 1058 aaKnown RBP17.48■□□□□ 0.39
SMG6-220ENST00000576218 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 CCDC148Q8NFR7 591 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 BADQ92934 168 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 PCDHA6Q9UN73 950 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 NOD1Q9Y239 953 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 PCDHA8Q9Y5H6 950 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 DNAH12Q6ZR08 3092 aa17.48■□□□□ 0.39
SMG6-220ENST00000576218 A0A1W2PPC1 479 aa17.47■□□□□ 0.39
SMG6-220ENST00000576218 TRIM43BA6NCK2 446 aa17.47■□□□□ 0.39
SMG6-220ENST00000576218 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
SMG6-220ENST00000576218 FOSP01100 380 aaPredicted RBP17.47■□□□□ 0.39
SMG6-220ENST00000576218 BMP8BP34820 402 aa17.47■□□□□ 0.39
SMG6-220ENST00000576218 SSRP1Q08945 709 aaKnown RBP17.47■□□□□ 0.39
SMG6-220ENST00000576218 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms