RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 RIN2Q8WYP3 895 aaPredicted RBP8.73□□□□□ -1.01
RAB40B-210ENST00000576148 CCDC17Q96LX7 622 aa8.73□□□□□ -1.01
RAB40B-210ENST00000576148 NEK1Q96PY6 1258 aa8.73□□□□□ -1.01
RAB40B-210ENST00000576148 ACAD9Q9H845 621 aa8.73□□□□□ -1.01
RAB40B-210ENST00000576148 KANSL2Q9H9L4 492 aa8.73□□□□□ -1.01
RAB40B-210ENST00000576148 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
RAB40B-210ENST00000576148 GCN1Q92616 2671 aaKnown RBP8.73□□□□□ -1.01
RAB40B-210ENST00000576148 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
RAB40B-210ENST00000576148 FSD2A1L4K1 749 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 STK25O00506 426 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 NKRFO15226 690 aaKnown RBP eCLIP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 KINO60870 393 aaKnown RBP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 CYP2E1P05181 493 aaPredicted RBP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 SRGAP2BP0DMP2 458 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 PTK7Q13308 1070 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 PLEKHG4Q58EX7 1191 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 TRAF7Q6Q0C0 670 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 SEPT8Q92599 483 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 NUP88Q99567 741 aaPredicted RBP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
RAB40B-210ENST00000576148 A1CFQ9NQ94 594 aaKnown RBP8.72□□□□□ -1.01
RAB40B-210ENST00000576148 FOCADQ5VW36 1801 aa8.71□□□□□ -1.01
RAB40B-210ENST00000576148 ASPMQ8IZT6 3477 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 RSPH10B2B2RC85 870 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 C2CD4DB7Z1M9 353 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 ASGR2P07307 311 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 LINC00271P0C7V0 271 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 RSPH10BP0C881 870 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 UBTFL1P0CB47 393 aaPredicted RBP8.71□□□□□ -1.02
RAB40B-210ENST00000576148 SP9P0CG40 484 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 DNAJB1P25685 340 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 TTC39AQ5SRH9 613 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 LRSAM1Q6UWE0 723 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 C7orf31Q8N865 590 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 MICAL1Q8TDZ2 1067 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 ATP8B4Q8TF62 1192 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 P2RX5Q93086 422 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 BORCS6Q96GS4 357 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 S1PR5Q9H228 398 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 GPR108Q9NPR9 543 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 RNF216Q9NWF9 866 aaPredicted RBP8.71□□□□□ -1.02
RAB40B-210ENST00000576148 GTF2IRD1Q9UHL9 959 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 FBXL21Q9UKT6 434 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 ZMIZ1Q9ULJ6 1067 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
RAB40B-210ENST00000576148 TRIP12Q14669 1992 aaPredicted RBP8.71□□□□□ -1.02
RAB40B-210ENST00000576148 MYH1P12882 1939 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 SCN10AQ9Y5Y9 1956 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 RBM47A0AV96 593 aaKnown RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 PER2O15055 1255 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 IDH1O75874 414 aaKnown RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 ARP10275 920 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 RFX1P22670 979 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 RBM10P98175 930 aaKnown RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 EVX2Q03828 476 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 PDE4BQ07343 736 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 BTG3Q14201 252 aaPredicted RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 PPP2R5BQ15173 497 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 CCDC158Q5M9N0 1113 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 SIX5Q8N196 739 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 SPPL3Q8TCT6 385 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 MORC4Q8TE76 937 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 CDCA3Q99618 268 aaPredicted RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 PIH1D3Q9NQM4 214 aaKnown RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 RNF146Q9NTX7 359 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 ADD3Q9UEY8 706 aaKnown RBP8.7□□□□□ -1.02
RAB40B-210ENST00000576148 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 HDAC5Q9UQL6 1122 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 ADGRA3Q8IWK6 1321 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 MICAL3Q7RTP6 2002 aa8.7□□□□□ -1.02
RAB40B-210ENST00000576148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.69□□□□□ -1.02
RAB40B-210ENST00000576148 F5H6K3 240 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 ITGB1P05556 798 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 FDX1P10109 184 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 KCNA4P22459 653 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 THPOP40225 353 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 TECP42680 631 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 SHC2P98077 582 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 KLRC3Q07444 240 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 TRIM71Q2Q1W2 868 aaKnown RBP8.69□□□□□ -1.02
RAB40B-210ENST00000576148 TKFCQ3LXA3 575 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 ANKRD54Q6NXT1 300 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 ZDHHC14Q8IZN3 488 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 LRRC47Q8N1G4 583 aaKnown RBP8.69□□□□□ -1.02
RAB40B-210ENST00000576148 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
RAB40B-210ENST00000576148 POF1BQ8WVV4 589 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 DYNLL2Q96FJ2 89 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 APOL5Q9BWW9 433 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 CRNKL1Q9BZJ0 848 aaKnown RBP8.69□□□□□ -1.02
RAB40B-210ENST00000576148 ERVK-5Q9HDB9 667 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 HDAC6Q9UBN7 1215 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 FEM1BQ9UK73 627 aa8.69□□□□□ -1.02
RAB40B-210ENST00000576148 SLC30A4O14863 429 aa8.68□□□□□ -1.02
RAB40B-210ENST00000576148 NDUFB10O96000 172 aa8.68□□□□□ -1.02
RAB40B-210ENST00000576148 MMP3P08254 477 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms