RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 TOX2Q96NM4 488 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 RNF26Q9BY78 433 aaPredicted RBP15.61■□□□□ 0.09
CIITA-210ENST00000575513 RIC8AQ9NPQ8 531 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 STARD7Q9NQZ5 370 aa15.61■□□□□ 0.09
CIITA-210ENST00000575513 DDX41Q9UJV9 622 aaKnown RBP15.61■□□□□ 0.09
CIITA-210ENST00000575513 STXBP3O00186 592 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 RGS20O76081 388 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 FOSP01100 380 aaPredicted RBP15.6■□□□□ 0.09
CIITA-210ENST00000575513 MYCLP12524 364 aaPredicted RBP15.6■□□□□ 0.09
CIITA-210ENST00000575513 SCG2P13521 617 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 NAPAP54920 295 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 AKAP17AQ02040 695 aaKnown RBP15.6■□□□□ 0.09
CIITA-210ENST00000575513 PCNX4Q63HM2 1172 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 ANKRD33Q7Z3H0 272 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 C7orf61Q8IZ16 206 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 OR6J1Q8NGC5 347 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 CCDC12Q8WUD4 166 aaPredicted RBP15.6■□□□□ 0.09
CIITA-210ENST00000575513 GPKOWQ92917 476 aaPredicted RBP eCLIP15.6■□□□□ 0.09
CIITA-210ENST00000575513 POLR3EQ9NVU0 708 aa15.6■□□□□ 0.09
CIITA-210ENST00000575513 CEP290O15078 2479 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 DNAH12Q6ZR08 3092 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 A0A0U1RQG5 324 aaPredicted RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 ESYT2A0FGR8 921 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 SPDYE3A6NKU9 549 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 ARIH2O95376 493 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 GH1P01241 217 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 ICAM3P32942 547 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 CDK7P50613 346 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 CCT2P78371 535 aaKnown RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 BEX3Q00994 111 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 PKN1Q16512 942 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 GNPTABQ3T906 1256 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 FAM177A1Q8N128 213 aaPredicted RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 INPP4AQ96PE3 977 aaPredicted RBP15.59■□□□□ 0.09
CIITA-210ENST00000575513 EHMT1Q9H9B1 1298 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 MRVI1Q9Y6F6 885 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 LRRC37A2A6NM11 1700 aa15.59■□□□□ 0.09
CIITA-210ENST00000575513 SMCO2A6NFE2 343 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 CPLX1O14810 134 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 MRPS9P82933 396 aaKnown RBP15.58■□□□□ 0.08
CIITA-210ENST00000575513 LAMC2Q13753 1193 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 TYW1BQ6NUM6 668 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 TRIM22Q8IYM9 498 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 SLC43A3Q8NBI5 491 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 IL27Q8NEV9 243 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 IL31RAQ8NI17 732 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 VTI1AQ96AJ9 217 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 ZMYND12Q9H0C1 365 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 SH3GLB2Q9NR46 395 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 ATP11BQ9Y2G3 1177 aa15.58■□□□□ 0.08
CIITA-210ENST00000575513 DCDC2CA8MYV0 355 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 SPATA31C2B4DYI2 1134 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 ARVCFO00192 962 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 MAFGO15525 162 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PFKFB2O60825 505 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 GNA11P29992 359 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 ADCY7P51828 1080 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PURAQ00577 322 aaKnown RBP15.57■□□□□ 0.08
CIITA-210ENST00000575513 TLE2Q04725 743 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 ARHGAP1Q07960 439 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 SSRP1Q08945 709 aaKnown RBP15.57■□□□□ 0.08
CIITA-210ENST00000575513 AP3B2Q13367 1082 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 TRIM60Q495X7 471 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 CXCL17Q6UXB2 119 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PHKBQ93100 1093 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 SENP7Q9BQF6 1050 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
CIITA-210ENST00000575513 NCOA5Q9HCD5 579 aaKnown RBP15.57■□□□□ 0.08
CIITA-210ENST00000575513 C6orf50Q9HD87 102 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PRKAG2Q9UGJ0 569 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PCDHA6Q9UN73 950 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 PCDHA8Q9Y5H6 950 aa15.57■□□□□ 0.08
CIITA-210ENST00000575513 FIBPO43427 364 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 CDKL5O76039 1030 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 PTGS1P23219 599 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 BMP8BP34820 402 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 CLK2P49760 499 aaKnown RBP15.56■□□□□ 0.08
CIITA-210ENST00000575513 NEK4P51957 841 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 AK2P54819 239 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 CELF3Q5SZQ8 465 aaKnown RBP15.56■□□□□ 0.08
CIITA-210ENST00000575513 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 NLRX1Q86UT6 975 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 PPTC7Q8NI37 304 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 COPS5Q92905 334 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 CDHR1Q96JP9 859 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 MTG1Q9BT17 334 aaPredicted RBP15.56■□□□□ 0.08
CIITA-210ENST00000575513 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 PRO3102Q9H379 93 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 TPCN1Q9ULQ1 816 aa15.56■□□□□ 0.08
CIITA-210ENST00000575513 PPFIA4O75335 1185 aa15.55■□□□□ 0.08
CIITA-210ENST00000575513 DEXIO95424 95 aa15.55■□□□□ 0.08
CIITA-210ENST00000575513 CLTBP09497 229 aa15.55■□□□□ 0.08
CIITA-210ENST00000575513 HOXD8P13378 290 aaPredicted RBP15.55■□□□□ 0.08
CIITA-210ENST00000575513 RBM25P49756 843 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms