RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 CCDC62Q6P9F0 684 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 PHKBQ93100 1093 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 BARHL2Q9NY43 387 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 RBM27Q9P2N5 1060 aaKnown RBP23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 MRVI1Q9Y6F6 885 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 FRMPD4Q14CM0 1322 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 SCG2P13521 617 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 CPT1AP50416 773 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 PFKFB3Q16875 520 aaPredicted RBP23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 LY6KQ17RY6 165 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 C1orf53Q5VUE5 145 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 TYW1BQ6NUM6 668 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 CXCL17Q6UXB2 119 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 ZFP91Q96JP5 570 aaPredicted RBP23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 ELP1O95163 1332 aa23.79■■□□□ 1.4
HCFC1R1-208ENST00000575214 SPDYE3A6NKU9 549 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 PRPF3O43395 683 aaKnown RBP23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 IFNAR1P17181 557 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 NTRK3Q16288 839 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 BRDTQ58F21 947 aaPredicted RBP23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 SLC26A6Q9BXS9 759 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 SMCO2A6NFE2 343 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 CPLX1O14810 134 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 GH1P01241 217 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 ADCY7P51828 1080 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 RNF26Q9BY78 433 aaPredicted RBP23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 RIC8AQ9NPQ8 531 aa23.78■■□□□ 1.4
HCFC1R1-208ENST00000575214 A0A0U1RQG5 324 aaPredicted RBP23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 PQBP1O60828 265 aaKnown RBP23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 CABYRO75952 493 aa23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 RGS20O76081 388 aa23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 ANKRD1Q15327 319 aa23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 ALDH8A1Q9H2A2 487 aaPredicted RBP23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 POLR3EQ9NVU0 708 aa23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 PRKAG2Q9UGJ0 569 aa23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 DDX41Q9UJV9 622 aaKnown RBP23.77■■□□□ 1.4
HCFC1R1-208ENST00000575214 STAM2O75886 525 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 MYL3P08590 195 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 AK2P54819 239 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 MRPS9P82933 396 aaKnown RBP23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 TLE2Q04725 743 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 PKN1Q16512 942 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 GNPTABQ3T906 1256 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 PCNX4Q63HM2 1172 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 KCNV1Q6PIU1 500 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 CPLX2Q6PUV4 134 aaKnown RBP23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 CHRDL2Q6WN34 429 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 GLT8D2Q9H1C3 349 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 EHMT1Q9H9B1 1298 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 PRDM5Q9NQX1 630 aaPredicted RBP23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 RTEL1Q9NZ71 1219 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 PCDHA6Q9UN73 950 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 PCDHA8Q9Y5H6 950 aa23.76■■□□□ 1.39
HCFC1R1-208ENST00000575214 NEK4P51957 841 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 ARHGAP1Q07960 439 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 XRRA1Q6P2D8 792 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 TRIM22Q8IYM9 498 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 CCDC12Q8WUD4 166 aaPredicted RBP23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 SLKQ9H2G2 1235 aaPredicted RBP23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 PCDH10Q9P2E7 1040 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 TPCN1Q9ULQ1 816 aa23.75■■□□□ 1.39
HCFC1R1-208ENST00000575214 A6NJR5 290 aa23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 ARVCFO00192 962 aa23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 SSRP1Q08945 709 aaKnown RBP23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 TEX2Q8IWB9 1127 aa23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 DHX37Q8IY37 1157 aaKnown RBP23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 AFG1LQ8WV93 481 aa23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 INPP4AQ96PE3 977 aaPredicted RBP23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 DNAH12Q6ZR08 3092 aa23.74■■□□□ 1.39
HCFC1R1-208ENST00000575214 MROH7Q68CQ1 1323 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 KIAA1217Q5T5P2 1943 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 DCDC2CA8MYV0 355 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 TGFB3P10600 412 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 PURAQ00577 322 aaKnown RBP23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 PGBD1Q96JS3 809 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 PDLIM7Q9NR12 457 aa23.73■■□□□ 1.39
HCFC1R1-208ENST00000575214 SORBS3O60504 671 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 FOSP01100 380 aaPredicted RBP23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 CLTBP09497 229 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 UBA1P22314 1058 aaKnown RBP23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 PSMC6P62333 389 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 SCRN1Q12765 414 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 ITGA7Q13683 1181 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 LAMC2Q13753 1193 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 ANKRD33Q7Z3H0 272 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 MTG1Q9BT17 334 aaPredicted RBP23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 C6orf50Q9HD87 102 aa23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 COLQQ9Y215 455 aaPredicted RBP23.72■■□□□ 1.39
HCFC1R1-208ENST00000575214 ESYT2A0FGR8 921 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 FIBPO43427 364 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 KPNA6O60684 536 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 PFKFB2O60825 505 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 GGPS1O95749 300 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 MMP3P08254 477 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 CDK7P50613 346 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 AP3B2Q13367 1082 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 NLRX1Q86UT6 975 aa23.71■■□□□ 1.39
HCFC1R1-208ENST00000575214 CCDC148Q8NFR7 591 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms