RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GNAQP50148 359 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 CCL23P55773 120 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 GHRHRQ02643 423 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 PGM5Q15124 567 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 NBPF20Q3BBV1 942 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 SYNE3Q6ZMZ3 975 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 MICU3Q86XE3 530 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 CCDC82Q8N4S0 544 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 SAMD3Q8N6K7 520 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 LZTS2Q9BRK4 669 aa14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 TRMT13Q9NUP7 481 aaKnown RBP14.68□□□□□ -0.06
NPLOC4-213ENST00000573519 UMODL1Q5DID0 1318 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 MMP3P08254 477 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 CCND2P30279 289 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 DHX37Q8IY37 1157 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 IL31RAQ8NI17 732 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 CUL5Q93034 780 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 TCEANC2Q96MN5 208 aa14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.67□□□□□ -0.062e-18■□□□□ 10.7
NPLOC4-213ENST00000573519 DDX41Q9UJV9 622 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-213ENST00000573519 hCG_1642624A0A1W2PR95 340 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 SUPT20HL2P0C7V6 817 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 CYP2C9P11712 490 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 CASTP20810 708 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 SMARCA1P28370 1054 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 ERICH6BQ5W0A0 696 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 VSIG10LQ86VR7 867 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 FANCBQ8NB91 859 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 NOC4LQ9BVI4 516 aaKnown RBP14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 MTMR10Q9NXD2 777 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 NAP1L2Q9ULW6 460 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 NOD1Q9Y239 953 aa14.66□□□□□ -0.06
NPLOC4-213ENST00000573519 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 FGD1P98174 961 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 KRT32Q14532 448 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 DGKDQ16760 1214 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 ADCK5Q3MIX3 580 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 TMEM240Q5SV17 173 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 NFRKBQ6P4R8 1299 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 PSRC1Q6PGN9 363 aaPredicted RBP14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 C16orf59Q7L2K0 433 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 IL23AQ9NPF7 189 aa14.65□□□□□ -0.06
NPLOC4-213ENST00000573519 RGS20O76081 388 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 GGPS1O95749 300 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 FAM109BQ6ICB4 259 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 KCNV1Q6PIU1 500 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 USP17L6PQ6QN14 398 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 TMTC3Q6ZXV5 915 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 SGMS1Q86VZ5 419 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 SCLYQ96I15 445 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 WNT8AQ9H1J5 351 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 MLXIPQ9HAP2 919 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 RTEL1Q9NZ71 1219 aa14.64□□□□□ -0.07
NPLOC4-213ENST00000573519 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 ZBTB43O43298 467 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 FGBP02675 491 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 ZNF286BP0CG31 522 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 UBA1P22314 1058 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 TSGA10IPQ3SY00 556 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 APOA5Q6Q788 366 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 HEATR3Q7Z4Q2 680 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 PPTC7Q8NI37 304 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 GPKOWQ92917 476 aaPredicted RBP eCLIP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 EMID1Q96A84 441 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 SPATA33Q96N06 139 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 ALG1Q9BT22 464 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 RBM28Q9NW13 759 aaKnown RBP14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 BRPF3Q9ULD4 1205 aa14.63□□□□□ -0.07
NPLOC4-213ENST00000573519 KIAA1217Q5T5P2 1943 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 KLF18A0A0U1RQI7 1052 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 GOLGA8BA8MQT2 603 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 HMGB1P09429 215 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 CPA1P15085 419 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 PSEN2P49810 448 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 SP2Q02086 613 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 PTGISQ16647 500 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 RTN1Q16799 776 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 CELF3Q5SZQ8 465 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 MYSM1Q5VVJ2 828 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 DEFB128Q7Z7B8 93 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 C7orf31Q8N865 590 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 RETREG2Q8NC44 543 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 KAT2BQ92831 832 aa14.62□□□□□ -0.07
NPLOC4-213ENST00000573519 JAKMIP1Q96N16 626 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms