RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FCHSD1Q86WN1 690 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 FBXO16Q8IX29 292 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 SMARCC2Q8TAQ2 1214 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 NSUN6Q8TEA1 469 aaKnown RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 TAAR1Q96RJ0 339 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 UIMC1Q96RL1 719 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 RMDN3Q96TC7 470 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 MAF1Q9H063 256 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 ZNF576Q9H609 170 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 VTA1Q9NP79 307 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 MAP3K20Q9NYL2 800 aaKnown RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 DDX49Q9Y6V7 483 aaKnown RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 LOC102724159A0A0B4J2E5 919 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 DNM1LO00429 736 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 CPLX1O14810 134 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 PGK1P00558 417 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 C6orf222P0C671 652 aaPredicted RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 COL6A1P12109 1028 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 EIF2AK2P19525 551 aaKnown RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 DNAJB2P25686 324 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 CDC27P30260 824 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 RCAN1P53805 252 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 NAPAP54920 295 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 ANAPC15P60006 121 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 TNFAIP2Q03169 654 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 STK3Q13188 491 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 PWP2Q15269 919 aaKnown RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 STXBP2Q15833 593 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 SLC35G1Q2M3R5 365 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 SAMD3Q8N6K7 520 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 SYTL5Q8TDW5 730 aaPredicted RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 GPKOWQ92917 476 aaPredicted RBP eCLIP8.96□□□□□ -0.98
SMG6-211ENST00000572369 LENG1Q96BZ8 264 aaPredicted RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 SENP6Q9GZR1 1112 aaPredicted RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 UPF2Q9HAU5 1272 aaKnown RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 V9GY48 417 aaPredicted RBP8.96□□□□□ -0.98
SMG6-211ENST00000572369 CNTNAP5Q8WYK1 1306 aa8.96□□□□□ -0.98
SMG6-211ENST00000572369 KIAA1217Q5T5P2 1943 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 DUSP11O75319 330 aaKnown RBP8.95□□□□□ -0.98
SMG6-211ENST00000572369 SEC24BO95487 1268 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 MYCLP12524 364 aaPredicted RBP8.95□□□□□ -0.98
SMG6-211ENST00000572369 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
SMG6-211ENST00000572369 HSD17B4P51659 736 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 TOB2Q14106 344 aaPredicted RBP8.95□□□□□ -0.98
SMG6-211ENST00000572369 ANKRD1Q15327 319 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 LRRC41Q15345 812 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 IQSEC1Q6DN90 963 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
SMG6-211ENST00000572369 SEPT14Q6ZU15 432 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 FBXL16Q8N461 479 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 FERMT2Q96AC1 680 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 IWS1Q96ST2 819 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 AGXT2Q9BYV1 514 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 WDR11Q9BZH6 1224 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 AP5M1Q9H0R1 490 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 PSTPIP2Q9H939 334 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 PDGFCQ9NRA1 345 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 COL20A1Q9P218 1284 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 ASTN1O14525 1302 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 ATRXP46100 2492 aa8.95□□□□□ -0.98
SMG6-211ENST00000572369 CHD6Q8TD26 2715 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 hCG_1984214I3L0E3 225 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 OPLAHO14841 1288 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 DYNC1LI2O43237 492 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 NR3C2P08235 984 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 TXNP10599 105 aaKnown RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 NEK4P51957 841 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 C8orf34Q49A92 452 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 BRDTQ58F21 947 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 GNASQ5JWF2 1037 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 TAPT1Q6NXT6 567 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 USP17L6PQ6QN14 398 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 TRIM22Q8IYM9 498 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 ZNF713Q8N859 430 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 PCSK9Q8NBP7 692 aaKnown RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 MORC4Q8TE76 937 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 SCFD2Q8WU76 684 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 SLC26A6Q9BXS9 759 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 SLKQ9H2G2 1235 aaPredicted RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 EHMT1Q9H9B1 1298 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
SMG6-211ENST00000572369 PXMP2Q9NR77 195 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 PRKAG2Q9UGJ0 569 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 SYNRGQ9UMZ2 1314 aa8.94□□□□□ -0.98
SMG6-211ENST00000572369 MYH7BA7E2Y1 1941 aa8.93□□□□□ -0.98
SMG6-211ENST00000572369 CFAP47Q6ZTR5 3102 aa8.93□□□□□ -0.98
SMG6-211ENST00000572369 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
SMG6-211ENST00000572369 ZEB2O60315 1214 aa8.93□□□□□ -0.98
SMG6-211ENST00000572369 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
SMG6-211ENST00000572369 SMPD1P17405 629 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms