RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 POLR2MP0CAP2 368 aa15.93■□□□□ 0.14
RAB40B-204ENST00000571554 SMAD3P84022 425 aaKnown RBP15.93■□□□□ 0.14
RAB40B-204ENST00000571554 TTYH1Q9H313 450 aaPredicted RBP15.93■□□□□ 0.14
RAB40B-204ENST00000571554 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 hCG_1642624A0A1W2PR95 340 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
RAB40B-204ENST00000571554 DDAH1O94760 285 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 GHRHRQ02643 423 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 PGM5Q15124 567 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 GPKOWQ92917 476 aaPredicted RBP eCLIP15.92■□□□□ 0.14
RAB40B-204ENST00000571554 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 MAF1Q9H063 256 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 SEMA6BQ9H3T3 888 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 IL23AQ9NPF7 189 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 DDX41Q9UJV9 622 aaKnown RBP15.92■□□□□ 0.14
RAB40B-204ENST00000571554 STXBP5LQ9Y2K9 1186 aa15.92■□□□□ 0.14
RAB40B-204ENST00000571554 RGS20O76081 388 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 KIF5BP33176 963 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 OTOP2Q7RTS6 562 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 CCDC82Q8N4S0 544 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 SRBD1Q8N5C6 995 aaKnown RBP15.91■□□□□ 0.14
RAB40B-204ENST00000571554 SLC17A8Q8NDX2 589 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
RAB40B-204ENST00000571554 CCDC136Q96JN2 1154 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 TMEM87BQ96K49 555 aa15.91■□□□□ 0.14
RAB40B-204ENST00000571554 CXXC1Q9P0U4 656 aaPredicted RBP15.91■□□□□ 0.14
RAB40B-204ENST00000571554 KPNA6O60684 536 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 CDC45O75419 566 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 ZNF286BP0CG31 522 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 PBX2P40425 430 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
RAB40B-204ENST00000571554 DEFB128Q7Z7B8 93 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 DHX37Q8IY37 1157 aaKnown RBP15.9■□□□□ 0.14
RAB40B-204ENST00000571554 MYLIPQ8WY64 445 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 CDX2Q99626 313 aaPredicted RBP15.9■□□□□ 0.14
RAB40B-204ENST00000571554 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 SEZ6LQ9BYH1 1024 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 DOCK5Q9H7D0 1870 aa15.9■□□□□ 0.14
RAB40B-204ENST00000571554 GBF1Q92538 1859 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.89■□□□□ 0.13
RAB40B-204ENST00000571554 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.89■□□□□ 0.13
RAB40B-204ENST00000571554 FGBP02675 491 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 SUPT20HL2P0C7V6 817 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 DNAJB2P25686 324 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 CCND2P30279 289 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 TRAF1Q13077 416 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 ADCK5Q3MIX3 580 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 NFRKBQ6P4R8 1299 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 VSIG10LQ86VR7 867 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 RASEFQ8IZ41 740 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 KAT2BQ92831 832 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 MAP3K14Q99558 947 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 ALG1Q9BT22 464 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 BCAS3Q9H6U6 928 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
RAB40B-204ENST00000571554 SEC63Q9UGP8 760 aaKnown RBP15.89■□□□□ 0.13
RAB40B-204ENST00000571554 NOD1Q9Y239 953 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 SLC12A7Q9Y666 1083 aa15.89■□□□□ 0.13
RAB40B-204ENST00000571554 CDH23Q9H251 3354 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 GGPS1O95749 300 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 CASTP20810 708 aaKnown RBP15.88■□□□□ 0.13
RAB40B-204ENST00000571554 UBA1P22314 1058 aaKnown RBP15.88■□□□□ 0.13
RAB40B-204ENST00000571554 LIFRP42702 1097 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 SP2Q02086 613 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 DGKDQ16760 1214 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 RASIP1Q5U651 963 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 RNF20Q5VTR2 975 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
RAB40B-204ENST00000571554 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 VWCEQ96DN2 955 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 NEK1Q96PY6 1258 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 TANC1Q9C0D5 1861 aa15.88■□□□□ 0.13
RAB40B-204ENST00000571554 TRIP12Q14669 1992 aaPredicted RBP15.87■□□□□ 0.13
RAB40B-204ENST00000571554 ZBBXA8MT70 800 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 CPA1P15085 419 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 PSEN2P49810 448 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 GNAQP50148 359 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
RAB40B-204ENST00000571554 LAMC2Q13753 1193 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 PTGISQ16647 500 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 HSDL1Q3SXM5 330 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 CELF3Q5SZQ8 465 aaKnown RBP15.87■□□□□ 0.13
RAB40B-204ENST00000571554 TMTC2Q8N394 836 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 HERVK_113Q902F9 699 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 TIFAQ96CG3 184 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 SPATA33Q96N06 139 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 PBX4Q9BYU1 374 aa15.87■□□□□ 0.13
RAB40B-204ENST00000571554 EYSQ5T1H1 3165 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 CALM1P0DP23 149 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 CALM2P0DP24 149 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 CALM3P0DP25 149 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 MFSD10Q14728 455 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 UBE2SQ16763 222 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 MYSM1Q5VVJ2 828 aa15.86■□□□□ 0.13
RAB40B-204ENST00000571554 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms