RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 ARHGEF4Q9NR80 690 aa9.16□□□□□ -0.94
CDC27-212ENST00000570818 GPR27Q9NS67 375 aa9.16□□□□□ -0.94
CDC27-212ENST00000570818 NPFFR2Q9Y5X5 522 aa9.16□□□□□ -0.94
CDC27-212ENST00000570818 X6R8D5 127 aa9.16□□□□□ -0.94
CDC27-212ENST00000570818 DLX3O60479 287 aa9.15□□□□□ -0.94
CDC27-212ENST00000570818 PABPC1P11940 636 aaKnown RBP9.15□□□□□ -0.94
CDC27-212ENST00000570818 AFF3P51826 1226 aaKnown RBP9.15□□□□□ -0.94
CDC27-212ENST00000570818 FAM129CQ86XR2 697 aa9.15□□□□□ -0.94
CDC27-212ENST00000570818 CDC6Q99741 560 aa9.15□□□□□ -0.94
CDC27-212ENST00000570818 ASGR2P07307 311 aa9.14□□□□□ -0.95
CDC27-212ENST00000570818 IGFBP6P24592 240 aaPredicted RBP9.14□□□□□ -0.95
CDC27-212ENST00000570818 DENND5AQ6IQ26 1287 aa9.14□□□□□ -0.95
CDC27-212ENST00000570818 PWWP2AQ96N64 755 aa9.14□□□□□ -0.95
CDC27-212ENST00000570818 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
CDC27-212ENST00000570818 MAFKO60675 156 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 DGKIO75912 1065 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 FBLN1P23142 703 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 PMLP29590 882 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 SPATC1Q76KD6 591 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 TMEFF1Q8IYR6 380 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 CPA5Q8WXQ8 436 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 DACT3Q96B18 629 aaPredicted RBP9.13□□□□□ -0.95
CDC27-212ENST00000570818 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 ZFYVE21Q9BQ24 234 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 PHF20Q9BVI0 1012 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 PCDH18Q9HCL0 1135 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 PFDN2Q9UHV9 154 aa9.13□□□□□ -0.95
CDC27-212ENST00000570818 ARNTLO00327 626 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 LCP1P13796 627 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 FOXO4P98177 505 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 SERINC3Q13530 473 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 NLRP10Q86W26 655 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 PANK1Q8TE04 598 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 DDX11Q96FC9 970 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 EPB41L1Q9H4G0 881 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 SIT1Q9Y3P8 196 aa9.12□□□□□ -0.95
CDC27-212ENST00000570818 LIMS1P48059 325 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 CACNB2Q08289 660 aaPredicted RBP9.11□□□□□ -0.95
CDC27-212ENST00000570818 SPOCD1Q6ZMY3 1216 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 ETV3LQ6ZN32 361 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 B3GNT8Q7Z7M8 397 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 NPM2Q86SE8 214 aaKnown RBP9.11□□□□□ -0.95
CDC27-212ENST00000570818 ZC3H18Q86VM9 953 aaKnown RBP9.11□□□□□ -0.95
CDC27-212ENST00000570818 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 OSBP2Q969R2 916 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 MKL1Q969V6 931 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 SRPK1Q96SB4 655 aaKnown RBP9.11□□□□□ -0.95
CDC27-212ENST00000570818 YIPF4Q9BSR8 244 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
CDC27-212ENST00000570818 PMF1-BGLAPU3KQ54 211 aa9.11□□□□□ -0.95
CDC27-212ENST00000570818 HGSO14964 777 aaPredicted RBP9.1□□□□□ -0.95
CDC27-212ENST00000570818 SGSM2O43147 1006 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 CAP1Q01518 475 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 KIZQ2M2Z5 673 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 ZC3H12BQ5HYM0 836 aaKnown RBP9.1□□□□□ -0.95
CDC27-212ENST00000570818 IFNL3Q8IZI9 196 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 ZBTB38Q8NAP3 1195 aaPredicted RBP9.1□□□□□ -0.95
CDC27-212ENST00000570818 BCAS3Q9H6U6 928 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 PALD1Q9ULE6 856 aa9.1□□□□□ -0.95
CDC27-212ENST00000570818 ARID1BQ8NFD5 2236 aaPredicted RBP9.1□□□□□ -0.95
CDC27-212ENST00000570818 KRIT1O00522 736 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 APPP05067 770 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 ATF2P15336 505 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 RASA3Q14644 834 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 FBLN7Q53RD9 439 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 STEAP3Q658P3 488 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 STYK1Q6J9G0 422 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 EPB41L4AQ9HCS5 686 aaPredicted RBP9.09□□□□□ -0.95
CDC27-212ENST00000570818 SNTG2Q9NY99 539 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 FBXL7Q9UJT9 491 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 ZNF652Q9Y2D9 606 aa9.09□□□□□ -0.95
CDC27-212ENST00000570818 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 TRBV23-1A0A0A0MS06 115 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 CYP2C8P10632 490 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 GPR85P60893 370 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 SUMO1P63165 101 aaKnown RBP9.08□□□□□ -0.96
CDC27-212ENST00000570818 YOD1Q5VVQ6 348 aaPredicted RBP9.08□□□□□ -0.96
CDC27-212ENST00000570818 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC27-212ENST00000570818 ALG1Q9BT22 464 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 NUB1Q9Y5A7 615 aa9.08□□□□□ -0.96
CDC27-212ENST00000570818 ADCY3O60266 1144 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 NAT1P18440 290 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 MC3RP41968 323 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 LBX2Q6XYB7 198 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 MIB1Q86YT6 1006 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 SMARCC2Q8TAQ2 1214 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 PHOSPHO1Q8TCT1 267 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 PLA2G2DQ9UNK4 145 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 PCDHB4Q9Y5E5 795 aa9.07□□□□□ -0.96
CDC27-212ENST00000570818 AQP7O14520 342 aa9.06□□□□□ -0.96
CDC27-212ENST00000570818 SASH1O94885 1247 aa9.06□□□□□ -0.96
CDC27-212ENST00000570818 GRK2P25098 689 aa9.06□□□□□ -0.96
CDC27-212ENST00000570818 GRK3P35626 688 aa9.06□□□□□ -0.96
CDC27-212ENST00000570818 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
CDC27-212ENST00000570818 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms