RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 ZNF286BP0CG31 522 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 TTF1Q15361 905 aaPredicted RBP8.6□□□□□ -1.03
SMG6-205ENST00000570659 LY6KQ17RY6 165 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 SBK1Q52WX2 424 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 BMP8AQ7Z5Y6 402 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 TMEM192Q8IY95 271 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 MYOCDQ8IZQ8 938 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 FEZF2Q8TBJ5 459 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 AFAP1L1Q8TED9 768 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 STAG1Q8WVM7 1258 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 MSLNLQ96KJ4 702 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 HAUS7Q99871 368 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 CPVLQ9H3G5 476 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 PRKAG3Q9UGI9 489 aa8.6□□□□□ -1.03
SMG6-205ENST00000570659 KIAA1217Q5T5P2 1943 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 ABHD14A-ACY1A0A1B0GW23 586 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 SMARCA5O60264 1052 aaPredicted RBP8.59□□□□□ -1.03
SMG6-205ENST00000570659 UPP2O95045 317 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 CALML3P27482 149 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 CPT1AP50416 773 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 STAT2P52630 851 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 PTPN5P54829 565 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 ZXDAP98168 799 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 BFSP2Q13515 415 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 UBE3CQ15386 1083 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 CHST3Q7LGC8 479 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 SESTD1Q86VW0 696 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 VN1R2Q8NFZ6 395 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 ALG1Q9BT22 464 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 SEZ6LQ9BYH1 1024 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
SMG6-205ENST00000570659 IGFLR1Q9H665 355 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 CCPG1Q9ULG6 757 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
SMG6-205ENST00000570659 CACNA1BQ00975 2339 aa8.59□□□□□ -1.03
SMG6-205ENST00000570659 MYH7BA7E2Y1 1941 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 FRMPD2Q68DX3 1309 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 DOCK5Q9H7D0 1870 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 PLXNA4Q9HCM2 1894 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 ZNF292O60281 2723 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 PRR23AA6NEV1 266 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 LOC730098B7Z3J9 87 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 STXBP3O00186 592 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 HAS3O00219 553 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 TTLL1O95922 423 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 ICAM1P05362 532 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 TXNP10599 105 aaKnown RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 ATP5JP18859 108 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 TFAP4Q01664 338 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 PPP2R5BQ15173 497 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 LRRFIP1Q32MZ4 808 aaKnown RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 TMED8Q6PL24 325 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 ITPRIPQ8IWB1 547 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 RPAP2Q8IXW5 612 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 FBXL6Q8N531 539 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 PANK1Q8TE04 598 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 ZFP91Q96JP5 570 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 RANBP17Q9H2T7 1088 aaKnown RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 RC3H2Q9HBD1 1191 aaKnown RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
SMG6-205ENST00000570659 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 CTDP1Q9Y5B0 961 aaPredicted RBP8.58□□□□□ -1.04
SMG6-205ENST00000570659 PTPDC1A2A3K4 754 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 AVPR2P30518 371 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 SLC1A4P43007 532 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 PSEN2P49810 448 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 RRP1P56182 461 aaKnown RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 RPS6P62753 249 aaKnown RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 ADAM15Q13444 863 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 SMAD4Q13485 552 aaKnown RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 PUS10Q3MIT2 529 aaKnown RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 PLEKHG4Q58EX7 1191 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 RCSD1Q6JBY9 416 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 TMEM105Q8N8V8 129 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 CAGE1Q8TC20 777 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 ATOH1Q92858 354 aaPredicted RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 GPKOWQ92917 476 aaPredicted RBP eCLIP8.57□□□□□ -1.04
SMG6-205ENST00000570659 FSD1Q9BTV5 496 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 BARX2Q9UMQ3 279 aaPredicted RBP8.57□□□□□ -1.04
SMG6-205ENST00000570659 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMG6-205ENST00000570659 INSL6Q9Y581 213 aa8.57□□□□□ -1.04
SMG6-205ENST00000570659 GPAA1O43292 621 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 CTSHP09668 335 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 SP100P23497 879 aaPredicted RBP8.56□□□□□ -1.04
SMG6-205ENST00000570659 GATMP50440 423 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 IKQ13123 557 aaPredicted RBP8.56□□□□□ -1.04
SMG6-205ENST00000570659 IKBKEQ14164 716 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 CBX2Q14781 532 aaPredicted RBP8.56□□□□□ -1.04
SMG6-205ENST00000570659 TKFCQ3LXA3 575 aa8.56□□□□□ -1.04
SMG6-205ENST00000570659 ZKSCAN2Q63HK3 967 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms