RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 PROSER3Q2NL68 480 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 SLC4A8Q2Y0W8 1093 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 EXOSC6Q5RKV6 272 aaKnown RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 LRFN4Q6PJG9 635 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 CCDC81Q6ZN84 652 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 REXO1Q8N1G1 1221 aaKnown RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 PLBD2Q8NHP8 589 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 PLPPR2Q96GM1 343 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 RAD18Q9NS91 495 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 TSPYL4Q9UJ04 414 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 ANGEL1Q9UNK9 670 aaKnown RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 SCAF8Q9UPN6 1271 aaKnown RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 POLR3KQ9Y2Y1 108 aaPredicted RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 MRVI1Q9Y6F6 885 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 SNCAIPQ9Y6H5 919 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 TAF1P21675 1872 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 LAMB2P55268 1798 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 H0YGN5 161 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 PIK3R2O00459 728 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 IRS4O14654 1257 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-209ENST00000569919 WISP1O95388 367 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 SLFN14P0C7P3 912 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
UBFD1-209ENST00000569919 PPP2R1AP30153 589 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 CLCQ05315 142 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 PRKG1Q13976 671 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 ZC3H12AQ5D1E8 599 aaKnown RBP7.67□□□□□ -1.18
UBFD1-209ENST00000569919 HDXQ7Z353 690 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 APOBEC3FQ8IUX4 373 aaKnown RBP7.67□□□□□ -1.18
UBFD1-209ENST00000569919 CD99L2Q8TCZ2 262 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 ZNF333Q96JL9 665 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 FERD3LQ96RJ6 166 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 ISCA1Q9BUE6 129 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 SRRTQ9BXP5 876 aaKnown RBP7.67□□□□□ -1.18
UBFD1-209ENST00000569919 MYO3BQ8WXR4 1341 aa7.67□□□□□ -1.18
UBFD1-209ENST00000569919 LRRC37AA6NMS7 1700 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 DCDC2CA8MYV0 355 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 ELNP15502 786 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 ETFBP38117 255 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 SLC9C1Q4G0N8 1177 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 STRIP1Q5VSL9 837 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 FBXW10Q5XX13 1052 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 IGF2-ASQ6U949 168 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 KIAA1211Q6ZU35 1233 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 C12orf40Q86WS4 652 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 DPF3Q92784 378 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 ELMO3Q96BJ8 720 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 RUSC1Q9BVN2 902 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 TMPRSS13Q9BYE2 586 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 PCDHB14Q9Y5E9 798 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 CSADQ9Y600 493 aa7.66□□□□□ -1.18
UBFD1-209ENST00000569919 DDX60Q8IY21 1712 aaKnown RBP7.66□□□□□ -1.18
UBFD1-209ENST00000569919 MEGF11A6BM72 1044 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 IGF2BP3O00425 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 XDHP47989 1333 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 CRHR2Q13324 411 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 KIAA0100Q14667 2235 aaKnown RBP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 SCN9AQ15858 1988 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 SUPT20HL1Q3ZLR7 823 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 CCDC152Q4G0S7 254 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 DACT2Q5SW24 774 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 CYFIP1Q7L576 1253 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 KDM3BQ7LBC6 1761 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 RBBP6Q7Z6E9 1792 aaKnown RBP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 ANKRD18AQ8IVF6 992 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 BEND7Q8N7W2 519 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 ZBTB38Q8NAP3 1195 aaPredicted RBP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 ZSCAN1Q8NBB4 408 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 CNTNAP5Q8WYK1 1306 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 ANAPC16Q96DE5 110 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 SHDQ96IW2 340 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 WNK4Q96J92 1243 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 PLEKHF1Q96S99 279 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 PCGF6Q9BYE7 350 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 EHMT1Q9H9B1 1298 aa7.65□□□□□ -1.18
UBFD1-209ENST00000569919 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
UBFD1-209ENST00000569919 SYNGAP1Q96PV0 1343 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 PDE8AO60658 829 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 ATE1O95260 518 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 PRRT3Q5FWE3 981 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 TTLL5Q6EMB2 1281 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 DPH6Q7L8W6 267 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 CRBNQ96SW2 442 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 LNPKQ9C0E8 428 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 COA1Q9GZY4 146 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
UBFD1-209ENST00000569919 RNF208Q9H0X6 261 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 DEFB129Q9H1M3 183 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 DBF4Q9UBU7 674 aaPredicted RBP7.64□□□□□ -1.19
UBFD1-209ENST00000569919 PPP1R9AQ9ULJ8 1098 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 CORINQ9Y5Q5 1042 aa7.64□□□□□ -1.19
UBFD1-209ENST00000569919 MAPK8IP3Q9UPT6 1336 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 PRAMEF27A3QJZ7 478 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 WDHD1O75717 1129 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms