RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 DDX49Q9Y6V7 483 aaKnown RBP11.29□□□□□ -0.6
CLN6-209ENST00000569336 ELP1O95163 1332 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 SPDYE3A6NKU9 549 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 CPLX1O14810 134 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 ASGR1P07306 291 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 MYCLP12524 364 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 SCG2P13521 617 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 CDC27P30260 824 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 ADCY7P51828 1080 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 RTP1P59025 263 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 FUT2Q10981 343 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 CCSAPQ6IQ19 270 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 XRRA1Q6P2D8 792 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 SLC39A5Q6ZMH5 540 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
CLN6-209ENST00000569336 SEZ6LQ9BYH1 1024 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 BARHL2Q9NY43 387 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
CLN6-209ENST00000569336 MICAL3Q7RTP6 2002 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 MYADML2A6NDP7 307 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 MEIS2O14770 477 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 DYNC1LI2O43237 492 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 KPNA6O60684 536 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 CDKL5O76039 1030 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 FOSP01100 380 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 GH1P01241 217 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 IFNAR1P17181 557 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 PFKFB3Q16875 520 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 PCNX4Q63HM2 1172 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 MCTP2Q6DN12 878 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 SEPT14Q6ZU15 432 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 VSIG10LQ86VR7 867 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 ALDH8A1Q9H2A2 487 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 UPF2Q9HAU5 1272 aaKnown RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 FAM217BQ9NTX9 383 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
CLN6-209ENST00000569336 ARID2Q68CP9 1835 aa11.27□□□□□ -0.61
CLN6-209ENST00000569336 SIP14410 1827 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 ESYT2A0FGR8 921 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 STXBP3O00186 592 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
CLN6-209ENST00000569336 TGFB3P10600 412 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 BEX3Q00994 111 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 AP3B2Q13367 1082 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 CCDC62Q6P9F0 684 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 USP17L6PQ6QN14 398 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 FAM177A1Q8N128 213 aaPredicted RBP11.26□□□□□ -0.61
CLN6-209ENST00000569336 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
CLN6-209ENST00000569336 VTI1AQ96AJ9 217 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 CDHR1Q96JP9 859 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
CLN6-209ENST00000569336 A6NJR5 290 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 DCDC2CA8MYV0 355 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 CTAGE5O15320 804 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 TLR3O15455 904 aaKnown RBP11.25□□□□□ -0.61
CLN6-209ENST00000569336 FIBPO43427 364 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 GNA11P29992 359 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
CLN6-209ENST00000569336 ANKRD33Q7Z3H0 272 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 NLRX1Q86UT6 975 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 TET1Q8NFU7 2136 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 PHKBQ93100 1093 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 TOX2Q96NM4 488 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
CLN6-209ENST00000569336 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
CLN6-209ENST00000569336 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
CLN6-209ENST00000569336 C6orf50Q9HD87 102 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 MYH15Q9Y2K3 1946 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 SZT2Q5T011 3432 aa11.25□□□□□ -0.61
CLN6-209ENST00000569336 A0A1W2PPC1 479 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 SMCO2A6NFE2 343 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 ARVCFO00192 962 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 PQBP1O60828 265 aaKnown RBP11.24□□□□□ -0.61
CLN6-209ENST00000569336 ARIH2O95376 493 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 DEXIO95424 95 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 CLTBP09497 229 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 AK2P54819 239 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 PURAQ00577 322 aaKnown RBP11.24□□□□□ -0.61
CLN6-209ENST00000569336 TLE2Q04725 743 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 ARHGAP1Q07960 439 aa11.24□□□□□ -0.61
CLN6-209ENST00000569336 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms