RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 GPR142Q7Z601 462 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 CCAR1Q8IX12 1150 aaKnown RBP11.93□□□□□ -0.5
CDH3-210ENST00000569117 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 SYTL5Q8TDW5 730 aaPredicted RBP11.93□□□□□ -0.5
CDH3-210ENST00000569117 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 MMP19Q99542 508 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 TRAIPQ9BWF2 469 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
CDH3-210ENST00000569117 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 COL20A1Q9P218 1284 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 CEP350Q5VT06 3117 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
CDH3-210ENST00000569117 RPTORQ8N122 1335 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 PCNTO95613 3336 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 DNAJC25-GNG10A0A024R161 153 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 STRNO43815 780 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 WDR78Q5VTH9 848 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 JAKMIP3Q5VZ66 844 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 PLEKHH3Q7Z736 793 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 FAM133AQ8N9E0 248 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 ANO3Q9BYT9 981 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 BIN2Q9UBW5 565 aaPredicted RBP11.92□□□□□ -0.5
CDH3-210ENST00000569117 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
CDH3-210ENST00000569117 MCM3APO60318 1980 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 PTPREP23469 700 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 ADORA2AP29274 412 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 SREBF1P36956 1147 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 SP3Q02447 781 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDH3-210ENST00000569117 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
CDH3-210ENST00000569117 PIK3AP1Q6ZUJ8 805 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 DNERQ8NFT8 737 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 SOCS4Q8WXH5 440 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 WBP1LQ9NX94 342 aa11.91□□□□□ -0.5
CDH3-210ENST00000569117 ASTN1O14525 1302 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 KIAA1217Q5T5P2 1943 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 LOC102724159A0A0B4J2E5 919 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 GPR25O00155 361 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 TNPO2O14787 897 aaKnown RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 CTGFP29279 349 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 FCGRTP55899 365 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 PWP2Q15269 919 aaKnown RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 MORN1Q5T089 497 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 BANK1Q8NDB2 785 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 TBCKQ8TEA7 893 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 PGBD1Q96JS3 809 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 FGD4Q96M96 766 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 PXMP2Q9NR77 195 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 ADD3Q9UEY8 706 aaKnown RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
CDH3-210ENST00000569117 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
CDH3-210ENST00000569117 TCHHQ07283 1943 aa11.9□□□□□ -0.51
CDH3-210ENST00000569117 PGK2P07205 417 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 ARHGAP4P98171 946 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 CNTN2Q02246 1040 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 INF2Q27J81 1249 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 NSUN6Q8TEA1 469 aaKnown RBP11.89□□□□□ -0.51
CDH3-210ENST00000569117 USP6NLQ92738 828 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 TRIM47Q96LD4 638 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 RMDN3Q96TC7 470 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 PDCD2LQ9BRP1 358 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
CDH3-210ENST00000569117 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 CYP3A4P08684 503 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 HOXC6P09630 235 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 GCFC2P16383 781 aaKnown RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 EDNRBP24530 442 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 RFC5P40937 340 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 PSMC4P43686 418 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 ALDH5A1P51649 535 aaPredicted RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 USP11P51784 963 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
CDH3-210ENST00000569117 KIF22Q14807 665 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 PGM5Q15124 567 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 PCNX4Q63HM2 1172 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
CDH3-210ENST00000569117 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms