RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CHMP4AQ9BY43 222 aa7.12□□□□□ -1.27
CDH13-211ENST00000568770 STAP2Q9UGK3 403 aa7.12□□□□□ -1.27
CDH13-211ENST00000568770 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
CDH13-211ENST00000568770 PHIPQ8WWQ0 1821 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 DOCK2Q92608 1830 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 ADGRA2Q96PE1 1338 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 MYBBP1AQ9BQG0 1328 aaKnown RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 PDHXO00330 501 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 FARP2O94887 1054 aaPredicted RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 ESRRAP11474 423 aaPredicted RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 RBM25P49756 843 aaKnown RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 UBXN2AP68543 259 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 FOXO4P98177 505 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 PPIL2Q13356 520 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 TDRD7Q8NHU6 1098 aaKnown RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
CDH13-211ENST00000568770 PPP4R2Q9NY27 417 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 FAM8A1Q9UBU6 413 aa7.11□□□□□ -1.27
CDH13-211ENST00000568770 DDX60LQ5H9U9 1706 aaKnown RBP7.1□□□□□ -1.27
CDH13-211ENST00000568770 CDH23Q9H251 3354 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 H3BRJ5 948 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 APAF1O14727 1248 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 FSCN2O14926 492 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 DDX3YO15523 660 aaKnown RBP7.1□□□□□ -1.27
CDH13-211ENST00000568770 FBXO24O75426 580 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 SGPL1O95470 568 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 TFRCP02786 760 aaKnown RBP7.1□□□□□ -1.27
CDH13-211ENST00000568770 GYG1P46976 350 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 PRKCZQ05513 592 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 PPATQ06203 517 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 PCDH1Q08174 1060 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 LDHAL6AQ6ZMR3 332 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 Q7L0L9 218 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 ANKRD23Q86SG2 305 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 SLC7A3Q8WY07 619 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 TSR2Q969E8 191 aaKnown RBP7.1□□□□□ -1.27
CDH13-211ENST00000568770 KLHDC7BQ96G42 594 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 MYH16Q9H6N6 1097 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 KCNK4Q9NYG8 393 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 VTI1BQ9UEU0 232 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 GABRQQ9UN88 632 aa7.1□□□□□ -1.27
CDH13-211ENST00000568770 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 DOCK1Q14185 1865 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 ADCY3O60266 1144 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 GSTT1P30711 240 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 HIBADHP31937 336 aaKnown RBP7.09□□□□□ -1.27
CDH13-211ENST00000568770 MOGSQ13724 837 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 IKBKEQ14164 716 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 CCDC57Q2TAC2 916 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 MIGA2Q7L4E1 593 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 FAM83AQ86UY5 434 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 FMR1NBQ8N0W7 255 aaPredicted RBP7.09□□□□□ -1.27
CDH13-211ENST00000568770 DEFB123Q8N688 67 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 LINS1Q8NG48 757 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 DNAAF4Q8WXU2 420 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 SCARF2Q96GP6 870 aaPredicted RBP7.09□□□□□ -1.27
CDH13-211ENST00000568770 FAM84BQ96KN1 310 aaPredicted RBP7.09□□□□□ -1.27
CDH13-211ENST00000568770 BACH2Q9BYV9 841 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 MRS2Q9HD23 443 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 CNNM1Q9NRU3 951 aa7.09□□□□□ -1.27
CDH13-211ENST00000568770 MUC3AQ02505 3323 aa7.09□□□□□ -1.28
CDH13-211ENST00000568770 PLXNB2O15031 1838 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 ATAD5Q96QE3 1844 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 CYP2C8P10632 490 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 ELNP15502 786 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 BMP8BP34820 402 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 GSK3AP49840 483 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 HDLBPQ00341 1268 aaKnown RBP7.08□□□□□ -1.28
CDH13-211ENST00000568770 UBE4AQ14139 1066 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 GRIK4Q16099 956 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 TWISTNBQ3B726 338 aaPredicted RBP7.08□□□□□ -1.28
CDH13-211ENST00000568770 TAF7LQ5H9L4 462 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 EPHA10Q5JZY3 1008 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 DCAF15Q66K64 600 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 LMBR1LQ6UX01 489 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 FBXO11Q86XK2 927 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 TEKT1Q969V4 418 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 HOOK2Q96ED9 719 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 PAWRQ96IZ0 340 aaKnown RBP7.08□□□□□ -1.28
CDH13-211ENST00000568770 ZDHHC15Q96MV8 337 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 DEFB118Q96PH6 123 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 ZNF341Q9BYN7 854 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 TMOD2Q9NZR1 351 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 STK17AQ9UEE5 414 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 STXBP5LQ9Y2K9 1186 aa7.08□□□□□ -1.28
CDH13-211ENST00000568770 FRMPD3Q5JV73 1810 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 ADAM11O75078 769 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 PAGE1O75459 146 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 B3GALT4O96024 378 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 XRCC5P13010 732 aaKnown RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 FLT3LGP49771 235 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 CHAF1AQ13111 956 aaPredicted RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 FOXD4L6Q3SYB3 417 aaPredicted RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 FKBP1CQ5VVH2 108 aa7.07□□□□□ -1.28
CDH13-211ENST00000568770 APOBEC3HQ6NTF7 200 aaKnown RBP7.07□□□□□ -1.28
CDH13-211ENST00000568770 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms