RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TMEM169Q96HH4 297 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 MRPL4Q9BYD3 311 aaKnown RBP5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 MCOLN1Q9GZU1 580 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 FANCLQ9NW38 375 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 SIT1Q9Y3P8 196 aa5.83□□□□□ -1.48
HERPUD1-212ENST00000567944 MYO1BO43795 1136 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 RAPGEF3O95398 923 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 FBLN1P23142 703 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 MAPKAPK2P49137 400 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 PLEKHN1Q494U1 663 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 FGD2Q7Z6J4 655 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 NETO2Q8NC67 525 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 PCDH19Q8TAB3 1148 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 TRMT2BQ96GJ1 504 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 DCP1AQ9NPI6 582 aaPredicted RBP5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 CLDND1Q9NY35 253 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 PCDHA9Q9Y5H5 950 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 PCDHA8Q9Y5H6 950 aa5.82□□□□□ -1.48
HERPUD1-212ENST00000567944 F8W031 263 aaPredicted RBP5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 ARVCFO00192 962 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 ENPP3O14638 875 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 WNT9AO14904 365 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 PLD2O14939 933 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 SGSM2O43147 1006 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 PEX10O60683 326 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 RASGRP1O95267 797 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 ASMTLO95671 621 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 CRTAMO95727 393 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 KCNA6P17658 529 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 PRR5P85299 388 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 NR1I3Q14994 352 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 HABP4Q5JVS0 413 aaKnown RBP5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 CNTD2Q9H8S5 307 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 NDOR1Q9UHB4 597 aa5.81□□□□□ -1.48
HERPUD1-212ENST00000567944 A0A1W2PQJ5 194 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 AQP7O14520 342 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 SOD2P04179 222 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 GRK2P25098 689 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 GRK3P35626 688 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 SLC6A11P48066 632 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 KIZQ2M2Z5 673 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 FNDC3BQ53EP0 1204 aaKnown RBP5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 ABHD17CQ6PCB6 329 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 C16orf86Q6ZW13 317 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 BRAPQ7Z569 592 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 KIAA0907Q7Z7F0 614 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 HOMER1Q86YM7 354 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 POU5F2Q8N7G0 328 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 APPBP2Q92624 585 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 CHAMP1Q96JM3 812 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 SGPP1Q9BX95 441 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 BCAS3Q9H6U6 928 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 IPPKQ9H8X2 491 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 SFMBT1Q9UHJ3 866 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 MBD1Q9UIS9 605 aaPredicted RBP5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 CD2APQ9Y5K6 639 aa5.8□□□□□ -1.48
HERPUD1-212ENST00000567944 IRS2Q9Y4H2 1338 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TEX51A0A1B0GUA7 166 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TCRBV16S1A1N1A0A5B0 115 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 FAM83GA6ND36 823 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TADA3O75528 432 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 RFPL3O75679 317 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 DNAJC8O75937 253 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 CKMP06732 381 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 SDSP20132 328 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 SRSF3P84103 164 aaKnown RBP5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 GUCY1A3Q02108 690 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 EMC4Q5J8M3 183 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TMC6Q7Z403 805 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 FBXO15Q8NCQ5 510 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TSPAN17Q96FV3 270 aa5.79□□□□□ -1.48
HERPUD1-212ENST00000567944 TCRBV5S4A2TA0A5A2 114 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 ABLIM1O14639 778 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 NKRFO15226 690 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 EFCAB14O75071 495 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 CDC45O75419 566 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 CDR1P51861 262 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 EPHB3P54753 998 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PAK1Q13153 545 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 C21orf62-AS1Q17RA5 79 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PLEKHG4Q58EX7 1191 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 ZNF648Q5T619 568 aaPredicted RBP5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 SDE2Q6IQ49 451 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 ZC3H14Q6PJT7 736 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 CABP7Q86V35 215 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PIP4K2CQ8TBX8 421 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PEX11GQ96HA9 241 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 KCNJ15Q99712 375 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 EPB41L1Q9H4G0 881 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 PCDHA5Q9Y5H7 936 aa5.78□□□□□ -1.48
HERPUD1-212ENST00000567944 ETV2O00321 342 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms