RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CCDC62Q6P9F0 684 aa24.86■■□□□ 1.57
NME3-210ENST00000567271 FERMT2Q96AC1 680 aa24.86■■□□□ 1.57
NME3-210ENST00000567271 SLKQ9H2G2 1235 aaPredicted RBP24.86■■□□□ 1.57
NME3-210ENST00000567271 EVI5O60447 810 aa24.85■■□□□ 1.57
NME3-210ENST00000567271 RGS20O76081 388 aa24.85■■□□□ 1.57
NME3-210ENST00000567271 ARIH2O95376 493 aa24.85■■□□□ 1.57
NME3-210ENST00000567271 BEX3Q00994 111 aa24.85■■□□□ 1.57
NME3-210ENST00000567271 LRRC26Q2I0M4 334 aa24.85■■□□□ 1.57
NME3-210ENST00000567271 CPLX2Q6PUV4 134 aaKnown RBP24.85■■□□□ 1.57
NME3-210ENST00000567271 PCSK9Q8NBP7 692 aaKnown RBP24.85■■□□□ 1.57
NME3-210ENST00000567271 ADCY7P51828 1080 aa24.84■■□□□ 1.57
NME3-210ENST00000567271 ATN1P54259 1190 aaPredicted RBP24.84■■□□□ 1.57
NME3-210ENST00000567271 SSRP1Q08945 709 aaKnown RBP24.84■■□□□ 1.57
NME3-210ENST00000567271 SLC39A5Q6ZMH5 540 aa24.84■■□□□ 1.57
NME3-210ENST00000567271 TRIM22Q8IYM9 498 aa24.84■■□□□ 1.57
NME3-210ENST00000567271 GLT8D2Q9H1C3 349 aa24.84■■□□□ 1.57
NME3-210ENST00000567271 A0A1W2PQ45 241 aaPredicted RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 A0A1W2PQY0 241 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 ASGR1P07306 291 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 MRPS9P82933 396 aaKnown RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 FSCN1Q16658 493 aaKnown RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 ME3Q16798 604 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 XRRA1Q6P2D8 792 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 COPS5Q92905 334 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 ZFP91Q96JP5 570 aaPredicted RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 UPF2Q9HAU5 1272 aaKnown RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 DDX41Q9UJV9 622 aaKnown RBP24.83■■□□□ 1.57
NME3-210ENST00000567271 PCDHA6Q9UN73 950 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 PCDHA8Q9Y5H6 950 aa24.83■■□□□ 1.57
NME3-210ENST00000567271 ESYT2A0FGR8 921 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 SPDYE3A6NKU9 549 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 STAM2O75886 525 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 LY6KQ17RY6 165 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 PCNX4Q63HM2 1172 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 OR6J1Q8NGC5 347 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 CCDC12Q8WUD4 166 aaPredicted RBP24.82■■□□□ 1.56
NME3-210ENST00000567271 NR2E3Q9Y5X4 410 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 MRVI1Q9Y6F6 885 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 KIAA1217Q5T5P2 1943 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 ALPK3Q96L96 1907 aa24.82■■□□□ 1.56
NME3-210ENST00000567271 DNAH12Q6ZR08 3092 aa24.81■■□□□ 1.56
NME3-210ENST00000567271 CLK2P49760 499 aaKnown RBP24.81■■□□□ 1.56
NME3-210ENST00000567271 SNX17Q15036 470 aa24.81■■□□□ 1.56
NME3-210ENST00000567271 C1orf53Q5VUE5 145 aa24.81■■□□□ 1.56
NME3-210ENST00000567271 ZMYND12Q9H0C1 365 aa24.81■■□□□ 1.56
NME3-210ENST00000567271 ZEB2O60315 1214 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 CDKL5O76039 1030 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 DEXIO95424 95 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 LARGE1O95461 756 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 FOSP01100 380 aaPredicted RBP24.8■■□□□ 1.56
NME3-210ENST00000567271 KCNV1Q6PIU1 500 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 C7orf61Q8IZ16 206 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 GLT1D1Q96MS3 346 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 INPP4AQ96PE3 977 aaPredicted RBP24.8■■□□□ 1.56
NME3-210ENST00000567271 C6orf50Q9HD87 102 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 STARD7Q9NQZ5 370 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 RTEL1Q9NZ71 1219 aa24.8■■□□□ 1.56
NME3-210ENST00000567271 GH1P01241 217 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 TGFB3P10600 412 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 CPT1AP50416 773 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 GNPTABQ3T906 1256 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 PRPF38BQ5VTL8 546 aaKnown RBP24.79■■□□□ 1.56
NME3-210ENST00000567271 NECAB1Q8N987 351 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 GTF3C6Q969F1 213 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 EHMT1Q9H9B1 1298 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 SH3GLB2Q9NR46 395 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 TMEM260Q9NX78 707 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 VPS54Q9P1Q0 977 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 ELP1O95163 1332 aa24.79■■□□□ 1.56
NME3-210ENST00000567271 A6NJR5 290 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 H0YGN5 161 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 CTDNEP1O95476 244 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 GNA11P29992 359 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 ICAM3P32942 547 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 RTP1P59025 263 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 ARHGAP1Q07960 439 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 AP3B2Q13367 1082 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 CXCL17Q6UXB2 119 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 CCDC148Q8NFR7 591 aa24.78■■□□□ 1.56
NME3-210ENST00000567271 SPATA31C2B4DYI2 1134 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 ADAMTS3O15072 1205 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 CABYRO75952 493 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 BRDTQ58F21 947 aaPredicted RBP24.77■■□□□ 1.56
NME3-210ENST00000567271 EMID1Q96A84 441 aaPredicted RBP24.77■■□□□ 1.56
NME3-210ENST00000567271 PGBD1Q96JS3 809 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 ANO3Q9BYT9 981 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 LIMCH1Q9UPQ0 1083 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 ATP11BQ9Y2G3 1177 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 CEP290O15078 2479 aa24.77■■□□□ 1.56
NME3-210ENST00000567271 SP2Q02086 613 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 LAMC2Q13753 1193 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 RABEP1Q15276 862 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 TRIM60Q495X7 471 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 JAKMIP3Q5VZ66 844 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 NLRX1Q86UT6 975 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 VTI1AQ96AJ9 217 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 POLR3EQ9NVU0 708 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 STK36Q9NRP7 1315 aa24.76■■□□□ 1.55
NME3-210ENST00000567271 FIBPO43427 364 aa24.75■■□□□ 1.55
NME3-210ENST00000567271 UBA1P22314 1058 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms