RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 TFR2Q9UP52 801 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 COL4A3BPQ9Y5P4 624 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 XRN1Q8IZH2 1706 aaKnown RBP12.78□□□□□ -0.36
CDH1-210ENST00000566612 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 POTEB3A0JP26 581 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 POTECB2RU33 542 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 GYPCP04921 128 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 POTEJP0CG39 1038 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 BMP3P12645 472 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 STAT3P40763 770 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 RPS6KA1Q15418 735 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 SLC10A5Q5PT55 438 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 POTEBQ6S5H4 581 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 ADSSL1Q8N142 457 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 ATRIPQ8WXE1 791 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 STK32BQ9NY57 414 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 JCADQ9P266 1359 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 KCNK3O14649 394 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 SORBS3O60504 671 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 NPR1P16066 1061 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 GUCY2FP51841 1108 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 UNC13DQ70J99 1090 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 FAM178BQ8IXR5 827 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 RETREG2Q8NC44 543 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 BHMT2Q9H2M3 363 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 SH2D4AQ9H788 454 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.36
CDH1-210ENST00000566612 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 PRPF6O94906 941 aaKnown RBP12.77□□□□□ -0.37
CDH1-210ENST00000566612 DMTNQ08495 405 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 REXO1L1PQ8IX06 675 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 CNTNAP4Q9C0A0 1308 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 CCDC151A5D8V7 595 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
CDH1-210ENST00000566612 FLOT1O75955 427 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 GNA14O95837 355 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
CDH1-210ENST00000566612 GCFC2P16383 781 aaKnown RBP12.77□□□□□ -0.37
CDH1-210ENST00000566612 KIF11P52732 1056 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 TTLL12Q14166 644 aaPredicted RBP12.77□□□□□ -0.37
CDH1-210ENST00000566612 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 PIGOQ8TEQ8 1089 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 SPZ1Q9BXG8 430 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 CCSER1Q9C0I3 900 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 RIC8AQ9NPQ8 531 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
CDH1-210ENST00000566612 TADA3O75528 432 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 C2orf54Q08AI8 447 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 PEX26Q7Z412 305 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 ADAT2Q7Z6V5 191 aaKnown RBP12.76□□□□□ -0.37
CDH1-210ENST00000566612 IL17RBQ9NRM6 502 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 MED1Q15648 1581 aaPredicted RBP12.76□□□□□ -0.37
CDH1-210ENST00000566612 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 FTCDO95954 541 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 HPDP32754 393 aaPredicted RBP12.76□□□□□ -0.37
CDH1-210ENST00000566612 GRIK5Q16478 980 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 PPP4R3AQ6IN85 833 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 TMC4Q7Z404 712 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
CDH1-210ENST00000566612 GOLGA6CA6NDK9 693 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 GOLGA6DP0CG33 693 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 ODR4Q5SWX8 454 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 CC2D2BQ6DHV5 1058 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
CDH1-210ENST00000566612 GOLGA6AQ9NYA3 693 aa12.76□□□□□ -0.37
CDH1-210ENST00000566612 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 ATP2C2O75185 946 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 CTTNQ14247 550 aaKnown RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 POTEGQ6S5H5 508 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 POTEEQ6S8J3 1075 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDH1-210ENST00000566612 PCDHA13Q9Y5I0 950 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 F5H6K3 240 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 hCG_1984214I3L0E3 225 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
CDH1-210ENST00000566612 PDHBP11177 359 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 NEFHP12036 1026 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 ADRA2BP18089 450 aa12.75□□□□□ -0.37
CDH1-210ENST00000566612 STAT1P42224 750 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms