RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 POLR2AP24928 1970 aaKnown RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 GLTPD2A6NH11 291 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 FOXN1O15353 648 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 PPP1R12BO60237 982 aaPredicted RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 USP2O75604 605 aaPredicted RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 BCRP11274 1271 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 BMP6P22004 513 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 PPP1R2P41236 205 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 AMPD3Q01432 767 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 MYL5Q02045 173 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 MTMR2Q13614 643 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 KARSQ15046 597 aaKnown RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 TKFCQ3LXA3 575 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 USH1GQ495M9 461 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 TMEM119Q4V9L6 283 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 COBLL1Q53SF7 1204 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 ETNPPLQ8TBG4 499 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 ENOX1Q8TC92 643 aaKnown RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 LENG9Q96B70 501 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 P2RX7Q99572 595 aaKnown RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 MTRQ99707 1265 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 NT5C3AQ9H0P0 336 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 AFG3L2Q9Y4W6 797 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
LSM3P5-201ENST00000566307 IQCA1LA6NCM1 817 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 AP5Z1O43299 807 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 ZBED4O75132 1171 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 MUTP22033 750 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 TECP42680 631 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 TXKP42681 527 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 IREB2P48200 963 aaKnown RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 ZNF75DP51815 510 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 SPP2Q13103 211 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 KRT79Q5XKE5 535 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 XRRA1Q6P2D8 792 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 IFNL1Q8IU54 200 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 AOPEPQ8N6M6 819 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 REPS2Q8NFH8 660 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 CLEC4DQ8WXI8 215 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 ERCC4Q92889 916 aaPredicted RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 TTC12Q9H892 705 aaPredicted RBP9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 FBXO28Q9NVF7 368 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 CCPG1Q9ULG6 757 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 SNCAIPQ9Y6H5 919 aa9.97□□□□□ -0.81
LSM3P5-201ENST00000566307 LOC285556D6RIA3 1793 aa9.96□□□□□ -0.81
LSM3P5-201ENST00000566307 PTPRFP10586 1907 aa9.96□□□□□ -0.81
LSM3P5-201ENST00000566307 OTOFQ9HC10 1997 aa9.96□□□□□ -0.81
LSM3P5-201ENST00000566307 SMCHD1A6NHR9 2005 aa9.96□□□□□ -0.81
LSM3P5-201ENST00000566307 IGLV3-22A0A075B6J6 115 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PVALEFA0A1B0GWK0 134 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 GOLGA6L6A8MZA4 724 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 BIN1O00499 593 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 VWA5AO00534 786 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 FLOT1O75955 427 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 RHOBTB3O94955 611 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PLCG1P19174 1290 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 EPHX2P34913 555 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 NF2P35240 595 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PPATQ06203 517 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 GRB10Q13322 594 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 CUL4BQ13620 913 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 ZNF658Q5TYW1 1059 aaPredicted RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 HAUS3Q68CZ6 603 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 CCDC174Q6PII3 467 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 FOXR2Q6PJQ5 311 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 CATSPERGQ6ZRH7 1159 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 KRT26Q7Z3Y9 468 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PNMA8AQ86V59 439 aaPredicted RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PNMA5Q96PV4 448 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 BLOC1S4Q9NUP1 217 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 HOXC10Q9NYD6 342 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 TMOD4Q9NZQ9 345 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 A0A0G2JMZ2 1700 aa9.96□□□□□ -0.82
LSM3P5-201ENST00000566307 PP2D1A8MPX8 630 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 MEIS1O00470 390 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 CXCL11O14625 94 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 KLRC4O43908 158 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 ZNF18P17022 549 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 AFMP43652 599 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 SNAP25P60880 206 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 COG2Q14746 738 aa9.95□□□□□ -0.82
LSM3P5-201ENST00000566307 LBX2Q6XYB7 198 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms