RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TIE1P35590 1138 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 DDIT3P35638 169 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 ATP8B2P98198 1209 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 NUGGCQ68CJ6 796 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 COL23A1Q86Y22 540 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-205ENST00000566136 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 C7orf61Q8IZ16 206 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 E2F8A0AVK6 867 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 RRN3P2A6NIE6 340 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 F8W031 263 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 GADD45BO75293 160 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 F13A1P00488 732 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 LPOP22079 712 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 KCNQ4P56696 695 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 PLEKHO1Q53GL0 409 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 CXorf57Q6NSI4 855 aaKnown RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 SYNPOQ8N3V7 929 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 RAPGEF4Q8WZA2 1011 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 TRIM64A6NGJ6 449 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 NEK4P51957 841 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 CLCQ05315 142 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 FGD2Q7Z6J4 655 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
UBFD1-205ENST00000566136 SGCZQ96LD1 299 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 ETNK1Q9HBU6 452 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 PRDM9Q9NQV7 894 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 CRYL1Q9Y2S2 319 aa12.14□□□□□ -0.47
UBFD1-205ENST00000566136 PLCB4Q15147 1175 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 C4orf48Q5BLP8 95 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-205ENST00000566136 ZBTB38Q8NAP3 1195 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-205ENST00000566136 SPATA9Q9BWV2 254 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-205ENST00000566136 GOLGA6L6A8MZA4 724 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 TPP1O14773 563 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 TMCC2O75069 709 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 TATP17735 454 aaPredicted RBP12.13□□□□□ -0.47
UBFD1-205ENST00000566136 MRE11P49959 708 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 COPAP53621 1224 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 HTRA3P83110 453 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 LCA5Q86VQ0 697 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
UBFD1-205ENST00000566136 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 KDM3BQ7LBC6 1761 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 MFSD4BQ5TF39 518 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 RNF219Q5W0B1 726 aaPredicted RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 TBCBQ99426 244 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 SRCIN1Q9C0H9 1055 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 TPCN1Q9ULQ1 816 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 PAPPAQ13219 1627 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 RTCAO00442 366 aaKnown RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 FBXO21O94952 628 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 MX1P20591 662 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 TNPO1Q92973 898 aaKnown RBP12.12□□□□□ -0.47
UBFD1-205ENST00000566136 GPSM3Q9Y4H4 160 aa12.12□□□□□ -0.47
UBFD1-205ENST00000566136 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
UBFD1-205ENST00000566136 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 DNAJC25-GNG10A0A024R161 153 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
UBFD1-205ENST00000566136 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
UBFD1-205ENST00000566136 TREML1Q86YW5 311 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 CPA6Q8N4T0 437 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 KIAA1191Q96A73 305 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 ODF2LQ9ULJ1 636 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 N4BP2Q86UW6 1770 aaPredicted RBP12.11□□□□□ -0.47
UBFD1-205ENST00000566136 NCAM2O15394 837 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 CNTFP26441 200 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 FCGRTP55899 365 aa12.11□□□□□ -0.47
UBFD1-205ENST00000566136 RABEP1Q15276 862 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms