RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 C16orf86Q6ZW13 317 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 FILIP1Q7Z7B0 1213 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 HOMER1Q86YM7 354 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 CREG2Q8IUH2 290 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 ATG3Q9NT62 314 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 IFT57Q9NWB7 429 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 TRPM2O94759 1503 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 NHSL1Q5SYE7 1610 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 AGRPO00253 132 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 FOSL1P15407 271 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 VAV1P15498 845 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 KIR3DL1P43629 444 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 EVA1CP58658 441 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 HSP90AA2PQ14568 343 aaPredicted RBP5.76□□□□□ -1.49
LINC00561-201ENST00000565815 AOC3Q16853 763 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 BRAPQ7Z569 592 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 GPR62Q9BZJ7 368 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 KCNH3Q9ULD8 1083 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 ZNF644Q9H582 1327 aaPredicted RBP5.76□□□□□ -1.49
LINC00561-201ENST00000565815 CLSPNQ9HAW4 1339 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 UNC13BO14795 1591 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 DNAJC25-GNG10A0A024R161 153 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 IGF2BP3O00425 579 aaKnown RBP eCLIP5.76□□□□□ -1.49
LINC00561-201ENST00000565815 H2AFB1P0C5Y9 115 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 H2AFB2P0C5Z0 115 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 RPL10P27635 214 aaKnown RBP5.76□□□□□ -1.49
LINC00561-201ENST00000565815 FEZ1Q99689 392 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 PCDHA9Q9Y5H5 950 aa5.76□□□□□ -1.49
LINC00561-201ENST00000565815 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.75□□□□□ -1.49
LINC00561-201ENST00000565815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.75□□□□□ -1.49
LINC00561-201ENST00000565815 C2orf71A6NGG8 1288 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 SSTR4P31391 388 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 EGR3Q06889 387 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 SLC35F1Q5T1Q4 408 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 TMEM52Q8NDY8 209 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 ZSWIM2Q8NEG5 633 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 EPN3Q9H201 632 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 BTG4Q9NY30 223 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 LAMC1P11047 1609 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 AURKAO14965 403 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 PPIL6Q8IXY8 311 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 GIMAP7Q8NHV1 300 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 NETO1Q8TDF5 533 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 TARS2Q9BW92 718 aaKnown RBP5.75□□□□□ -1.49
LINC00561-201ENST00000565815 TRIM39Q9HCM9 518 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 ERVK13-1Q9NX77 482 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 PCDHA8Q9Y5H6 950 aa5.75□□□□□ -1.49
LINC00561-201ENST00000565815 ZFYVE9O95405 1425 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 USP2O75604 605 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 CD8BP10966 210 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ZNF143P52747 638 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 IDI1Q13907 227 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 C22orf34Q6ZV56 151 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 NPLOC4Q8TAT6 608 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 SGSM3Q96HU1 749 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ASCC2Q9H1I8 757 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 GPATCH2Q9NW75 528 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ADAMTS6Q9UKP5 1117 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 BACE2Q9Y5Z0 518 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 SPHKAPQ2M3C7 1700 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ATRNO75882 1429 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 BLMP54132 1417 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 RIMS2Q9UQ26 1411 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 CRTAMO95727 393 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 FGFR1P11362 822 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ERVFC1P60507 584 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 CYP27A1Q02318 531 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 TEKQ02763 1124 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 LAPTM5Q13571 262 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ZNF655Q8N720 491 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 METTL22Q9BUU2 404 aaPredicted RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 CARS2Q9HA77 564 aaKnown RBP5.74□□□□□ -1.49
LINC00561-201ENST00000565815 PNPLA6Q8IY17 1366 aa5.74□□□□□ -1.49
LINC00561-201ENST00000565815 ASXL1Q8IXJ9 1541 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 POU3F3P20264 500 aaPredicted RBP5.73□□□□□ -1.49
LINC00561-201ENST00000565815 TIGD5Q53EQ6 642 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 BRINP3Q76B58 766 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 WAPLQ7Z5K2 1190 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 NIM1KQ8IY84 436 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 DAGLBQ8NCG7 672 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 SLC26A8Q96RN1 970 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 COQ6Q9Y2Z9 468 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 A0A087X0B3 334 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 IQCA1LA6NCM1 817 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 MYCLP1P12525 358 aaPredicted RBP5.73□□□□□ -1.49
LINC00561-201ENST00000565815 BMP8BP34820 402 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 MASP1P48740 699 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 TCEA2Q15560 299 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 IFI16Q16666 785 aaKnown RBP5.73□□□□□ -1.49
LINC00561-201ENST00000565815 CWF19L1Q69YN2 538 aaKnown RBP5.73□□□□□ -1.49
LINC00561-201ENST00000565815 CNNM4Q6P4Q7 775 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 STRA8Q7Z7C7 330 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 THNSL2Q86YJ6 484 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 ADAMTS10Q9H324 1103 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 RXFP1Q9HBX9 757 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 KIF15Q9NS87 1388 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
LINC00561-201ENST00000565815 TNPO3Q9Y5L0 923 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms