RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 SLC39A14Q15043 492 aa18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 UBE2SQ16763 222 aa18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 NEK8Q86SG6 692 aa18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 CCAR1Q8IX12 1150 aaKnown RBP18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 TRIB2Q92519 343 aa18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 AGBL1Q96MI9 1066 aa18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 FTOQ9C0B1 505 aaKnown RBP eCLIP18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
THUMPD1-203ENST00000565248 ZNF536O15090 1300 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 FAM205CA6NFA0 338 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 PIK3CDO00329 1044 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 ATP2A1O14983 1001 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 CLK2P49760 499 aaKnown RBP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 TOB1P50616 345 aaPredicted RBP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 INF2Q27J81 1249 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 EARS2Q5JPH6 523 aaKnown RBP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 MAP3K21Q5TCX8 1036 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 TMEM260Q9NX78 707 aa18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 MAP3K20Q9NYL2 800 aaKnown RBP18.61■□□□□ 0.57
THUMPD1-203ENST00000565248 PFASO15067 1338 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 TRAK2O60296 914 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 PPP6R2O75170 966 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 CFBP00751 764 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 FAM109BQ6ICB4 259 aaPredicted RBP18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 USP17L6PQ6QN14 398 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 TBCKQ8TEA7 893 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 COL25A1Q9BXS0 654 aaPredicted RBP18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 MAF1Q9H063 256 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 PCDHB6Q9Y5E3 794 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 MORC2Q9Y6X9 1032 aaPredicted RBP18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 PLXNB2O15031 1838 aa18.6■□□□□ 0.57
THUMPD1-203ENST00000565248 MEIS2O14770 477 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 MAPK4P31152 587 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 SNRNP48Q6IEG0 339 aaKnown RBP18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 LBX2Q6XYB7 198 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 REPS2Q8NFH8 660 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 TRERF1Q96PN7 1200 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 LBHD1Q9BQE6 289 aaPredicted RBP18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 ANP32EQ9BTT0 268 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
THUMPD1-203ENST00000565248 COL6A1P12109 1028 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 GCFC2P16383 781 aaKnown RBP18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 MCM7P33993 719 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 COPB2P35606 906 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 STAT3P40763 770 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 HERVK_113P62684 666 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 MDM2Q00987 491 aaPredicted RBP18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 PLS1Q14651 629 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 PTPAQ15257 358 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 ZNF174Q15697 407 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 LETM2Q2VYF4 491 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 RNF146Q9NTX7 359 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 TCHHQ07283 1943 aa18.58■□□□□ 0.56
THUMPD1-203ENST00000565248 LAD1O00515 517 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 CUTAO60888 179 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 RGS2P41220 211 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 C1QBPQ07021 282 aaKnown RBP18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 CACNB2Q08289 660 aaPredicted RBP18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 TMEM132BQ14DG7 1078 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 ADALQ6DHV7 355 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 KRI1Q8N9T8 703 aaKnown RBP18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 CHST13Q8NET6 341 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 SYAP1Q96A49 352 aaPredicted RBP18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 FERMT2Q96AC1 680 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 HOMER2Q9NSB8 354 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 ZNF214Q9UL59 606 aaPredicted RBP18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 RABGAP1Q9Y3P9 1069 aa18.57■□□□□ 0.56
THUMPD1-203ENST00000565248 PARP14Q460N5 1801 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 OPLAHO14841 1288 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 GADD45BO75293 160 aaPredicted RBP18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 TAL1P17542 331 aaPredicted RBP18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 MARCKSP29966 332 aaPredicted RBP18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 HOXA13P31271 388 aaPredicted RBP18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 HSD17B4P51659 736 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 USP11P51784 963 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 GHRHRQ02643 423 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 LRRC26Q2I0M4 334 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 FCHSD1Q86WN1 690 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 CLEC4DQ8WXI8 215 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 PGBD1Q96JS3 809 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 ACAD9Q9H845 621 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 PCDHA7Q9UN72 937 aa18.56■□□□□ 0.56
THUMPD1-203ENST00000565248 A0A1W2PQ27 194 aa18.55■□□□□ 0.56
THUMPD1-203ENST00000565248 A0A1W2PQ64 194 aa18.55■□□□□ 0.56
THUMPD1-203ENST00000565248 A0A1W2PQD8 194 aa18.55■□□□□ 0.56
THUMPD1-203ENST00000565248 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
THUMPD1-203ENST00000565248 NEMFO60524 1076 aa18.55■□□□□ 0.56
THUMPD1-203ENST00000565248 ATP2C1P98194 919 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms