RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 IGLV3-22A0A075B6J6 115 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 AMPD3Q01432 767 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 NCAPHQ15003 741 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 KDM3AQ9Y4C1 1321 aa21.99■■□□□ 1.11
CLN6-205ENST00000564846 ATP2A1O14983 1001 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 MSH4O15457 936 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 RPN1P04843 607 aaKnown RBP21.98■■□□□ 1.11
CLN6-205ENST00000564846 PARP14Q460N5 1801 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 ERO1BQ86YB8 467 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 LRRC15Q8TF66 581 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 GJA10Q969M2 543 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 TRERF1Q96PN7 1200 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 PNMA5Q96PV4 448 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 TRIM5Q9C035 493 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
CLN6-205ENST00000564846 RPTORQ8N122 1335 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 ERCC5P28715 1186 aaPredicted RBP21.97■■□□□ 1.11
CLN6-205ENST00000564846 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
CLN6-205ENST00000564846 TMEM119Q4V9L6 283 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 MUM1L1Q5H9M0 696 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 HYIQ5T013 277 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 WNK4Q96J92 1243 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 NT5C3AQ9H0P0 336 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 HOMER2Q9NSB8 354 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 OTOFQ9HC10 1997 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 CXCL11O14625 94 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 ZNF75DP51815 510 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 KCNB1Q14721 858 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 CEP55Q53EZ4 464 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 ARMC9Q7Z3E5 817 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 PLA2G4DQ86XP0 818 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 CYP2W1Q8TAV3 490 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 C7orf25Q9BPX7 421 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 NUDT12Q9BQG2 462 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 ELP3Q9H9T3 547 aa21.97■■□□□ 1.11
CLN6-205ENST00000564846 ZNF214Q9UL59 606 aaPredicted RBP21.97■■□□□ 1.11
CLN6-205ENST00000564846 SPDYE5A6NIY4 337 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 SETQ01105 290 aaPredicted RBP21.96■■□□□ 1.11
CLN6-205ENST00000564846 SPIRE1Q08AE8 756 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 HAUS3Q68CZ6 603 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 SV2BQ7L1I2 683 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 ERMNQ8TAM6 284 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 SYTL5Q8TDW5 730 aaPredicted RBP21.96■■□□□ 1.11
CLN6-205ENST00000564846 MAF1Q9H063 256 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 COL20A1Q9P218 1284 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 RLFQ13129 1914 aa21.96■■□□□ 1.11
CLN6-205ENST00000564846 TKFCQ3LXA3 575 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 ZNF658Q5TYW1 1059 aaPredicted RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 SNRNP48Q6IEG0 339 aaKnown RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 RNF207Q6ZRF8 634 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 PROCA1Q8NCQ7 364 aaPredicted RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 ENOX1Q8TC92 643 aaKnown RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 LARP4BQ92615 738 aaKnown RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 TEX13BQ9BXU2 312 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 TRIM9Q9C026 710 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 LRRC27Q9C0I9 530 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 BLOC1S4Q9NUP1 217 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.95■■□□□ 1.1
CLN6-205ENST00000564846 FRMPD4Q14CM0 1322 aa21.95■■□□□ 1.1
CLN6-205ENST00000564846 A0A0G2JLL6 359 aaPredicted RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 SPDYE16A6NNV3 312 aaPredicted RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 MEIS1O00470 390 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 PTMAP06454 111 aaKnown RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 CCT6AP40227 531 aaKnown RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 RPS6P62753 249 aaKnown RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 TMEM132BQ14DG7 1078 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 PRRT2Q7Z6L0 340 aaPredicted RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 RAD54LQ92698 747 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 OTUD5Q96G74 571 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 IRF6O14896 467 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 UBXN2AP68543 259 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 MOB2Q70IA6 237 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 CCDC47Q96A33 483 aaKnown RBP21.94■■□□□ 1.1
CLN6-205ENST00000564846 CLMNQ96JQ2 1002 aa21.94■■□□□ 1.1
CLN6-205ENST00000564846 HOXA7P31268 230 aaPredicted RBP21.93■■□□□ 1.1
CLN6-205ENST00000564846 PPIL2Q13356 520 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 PCNX4Q63HM2 1172 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 NIPA1Q7RTP0 329 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 SLC5A5Q92911 643 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 MRFAP1L1Q96HT8 127 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 UIMC1Q96RL1 719 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 MXRA8Q9BRK3 442 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 GTPBP4Q9BZE4 634 aaKnown RBP21.93■■□□□ 1.1
CLN6-205ENST00000564846 VAV3Q9UKW4 847 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 KCNH4Q9UQ05 1017 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 RIPK3Q9Y572 518 aa21.93■■□□□ 1.1
CLN6-205ENST00000564846 KLRC4O43908 158 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 RHOBTB3O94955 611 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 CDC25BP30305 580 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 STAT3P40763 770 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 FMR1Q06787 632 aaKnown RBP eCLIP21.92■■□□□ 1.1
CLN6-205ENST00000564846 TREML2Q5T2D2 321 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 RBBP6Q7Z6E9 1792 aaKnown RBP21.92■■□□□ 1.1
CLN6-205ENST00000564846 UNCXA6NJT0 531 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 PPP1R3GB7ZBB8 358 aa21.92■■□□□ 1.1
CLN6-205ENST00000564846 BCRP11274 1271 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms