RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 PRC1O43663 620 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 CFBP00751 764 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 PLA2G5P39877 138 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 HSD17B4P51659 736 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 RABGGTBP53611 331 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 ITGA7Q13683 1181 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 PPP2R2DQ66LE6 453 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 OR6J1Q8NGC5 347 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 COPS5Q92905 334 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 RMDN3Q96TC7 470 aa20.21■□□□□ 0.83
MAP1LC3B-204ENST00000563720 NKRFO15226 690 aaKnown RBP eCLIP20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ARIH2O95376 493 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MCM5P33992 734 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PSMC6P62333 389 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 RPUSD2Q8IZ73 545 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ZNF654Q8IZM8 581 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 IWS1Q96ST2 819 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SLC4A7Q9Y6M7 1214 aa20.2■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ZBBXA8MT70 800 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SH2B2O14492 632 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 DDAH1O94760 285 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TXNP10599 105 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CPT1AP50416 773 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TTLL4Q14679 1199 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SKIV2LQ15477 1246 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 AAK1Q2M2I8 961 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ARHGEF16Q5VV41 709 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CCDC62Q6P9F0 684 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 NECAB3Q96P71 396 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MAP3K14Q99558 947 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 NOC4LQ9BVI4 516 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SEZ6LQ9BYH1 1024 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PXMP2Q9NR77 195 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MAP3K20Q9NYL2 800 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 EIF2AK2P19525 551 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 STXBP2Q15833 593 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SEPT14Q6ZU15 432 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TMEM87BQ96K49 555 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 C1QTNF1Q9BXJ1 281 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PCDHA11Q9Y5I1 949 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 DOCK5Q9H7D0 1870 aa20.18■□□□□ 0.82
MAP1LC3B-204ENST00000563720 A6NJR5 290 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 B4GALT4O60513 344 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CDC45O75419 566 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MYL3P08590 195 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MYOGP15173 224 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TRAF1Q13077 416 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SAMD3Q8N6K7 520 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CCDC136Q96JN2 1154 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TRIP12Q14669 1992 aaPredicted RBP20.17■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SCN5AQ14524 2016 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 EIF3JO75822 258 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 NR3C2P08235 984 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 BMP1P13497 986 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ATP2A2P16615 1042 aaKnown RBP20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 LIFRP42702 1097 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TFF2Q03403 129 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TMTC2Q8N394 836 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SCLYQ96I15 445 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SPZ1Q9BXG8 430 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 GBF1Q92538 1859 aa20.16■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 SMARCA1P28370 1054 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 KIF5BP33176 963 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 LY6KQ17RY6 165 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PIBF1Q8WXW3 757 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 PDCD2LQ9BRP1 358 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 CHD9Q3L8U1 2897 aa20.15■□□□□ 0.82
MAP1LC3B-204ENST00000563720 TANC1Q9C0D5 1861 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 GCOM1H8Y6P7 765 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 GTPBP6O43824 516 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 KPNA6O60684 536 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PLEKHA8P1O95397 391 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 POLR2MP0CAP2 368 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RXRAP19793 462 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RNF20Q5VTR2 975 aa20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 DDX41Q9UJV9 622 aaKnown RBP20.14■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RGS20O76081 388 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 GH1P01241 217 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 KCNQ1P51787 676 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PGM5Q15124 567 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 VSIG10LQ86VR7 867 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RASEFQ8IZ41 740 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms