RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 HPSEQ9Y251 543 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 A0A1B0GVL5 298 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 NEMFO60524 1076 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 ZNF202O95125 648 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 MCM7P33993 719 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 EPHX2P34913 555 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 NDUFA8P51970 172 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 INF2Q27J81 1249 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 EARS2Q5JPH6 523 aaKnown RBP11□□□□□ -0.65
UBFD1-202ENST00000563366 SHC4Q6S5L8 630 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 ZNF280CQ8ND82 737 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 KLRG1Q96E93 195 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 AK8Q96MA6 479 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
UBFD1-202ENST00000563366 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
UBFD1-202ENST00000563366 GOLPH3LQ9H4A5 285 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 EHMT1Q9H9B1 1298 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 ABCB11O95342 1321 aa11□□□□□ -0.65
UBFD1-202ENST00000563366 PTPRFP10586 1907 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 SSC5DA1L4H1 1573 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 LOC285556D6RIA3 1793 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 PPP1R11O60927 126 aaPredicted RBP10.99□□□□□ -0.65
UBFD1-202ENST00000563366 PTPRAP18433 802 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 INPP5BP32019 993 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
UBFD1-202ENST00000563366 BACE1P56817 501 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 ZNF174Q15697 407 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
UBFD1-202ENST00000563366 PPP4R3AQ6IN85 833 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 MOXD1Q6UVY6 613 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 DTHD1Q6ZMT9 781 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 SAMD3Q8N6K7 520 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 RASGRP4Q8TDF6 673 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 TBCKQ8TEA7 893 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 C12orf42Q96LP6 360 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 SLF1Q9BQI6 1058 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
UBFD1-202ENST00000563366 KCNH3Q9ULD8 1083 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 MRPL11Q9Y3B7 192 aaKnown RBP10.99□□□□□ -0.65
UBFD1-202ENST00000563366 CSADQ9Y600 493 aa10.99□□□□□ -0.65
UBFD1-202ENST00000563366 SPDYE3A6NKU9 549 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 CCNT1O60563 726 aaKnown RBP10.98□□□□□ -0.65
UBFD1-202ENST00000563366 USP11P51784 963 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 CAMK4Q16566 473 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 STX1AQ16623 288 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 TMEM266Q2M3C6 531 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 LETM2Q2VYF4 491 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 JAKMIP3Q5VZ66 844 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 KRT26Q7Z3Y9 468 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 GAS2L3Q86XJ1 694 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 CNNM3Q8NE01 707 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.98□□□□□ -0.65
UBFD1-202ENST00000563366 KIFC2Q96AC6 838 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 MAF1Q9H063 256 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 MAP3K20Q9NYL2 800 aaKnown RBP10.98□□□□□ -0.65
UBFD1-202ENST00000563366 TMOD4Q9NZQ9 345 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
UBFD1-202ENST00000563366 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
UBFD1-202ENST00000563366 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
UBFD1-202ENST00000563366 VWA3AA6NCI4 1184 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 UNCXA6NJT0 531 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 ICAM1P05362 532 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 OR52Z1P0C646 297 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 VCAM1P19320 739 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 TYRO3Q06418 890 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 SPP2Q13103 211 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 UVSSAQ2YD98 709 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 USH1GQ495M9 461 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 NOM1Q5C9Z4 860 aaKnown RBP10.97□□□□□ -0.65
UBFD1-202ENST00000563366 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 CLIC6Q96NY7 704 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 SPSB2Q99619 263 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 FUCA2Q9BTY2 467 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 NAT10Q9H0A0 1025 aaKnown RBP10.97□□□□□ -0.65
UBFD1-202ENST00000563366 ANO10Q9NW15 660 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 MYPNQ86TC9 1320 aa10.97□□□□□ -0.65
UBFD1-202ENST00000563366 COL11A1P12107 1806 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-202ENST00000563366 ZBED4O75132 1171 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 FLOT1O75955 427 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 JUNDP17535 347 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 OAZ1P54368 228 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 KRBA2Q6ZNG9 492 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 MCF2L2Q86YR7 1114 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 CKAP2LQ8IYA6 745 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 CEP57L1Q8IYX8 460 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 ANKRD13AQ8IZ07 590 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 IQUBQ8NA54 791 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 ZKSCAN4Q969J2 545 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-202ENST00000563366 MTRQ99707 1265 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 ANO3Q9BYT9 981 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 GLIS2Q9BZE0 524 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-202ENST00000563366 CUEDC2Q9H467 287 aa10.96□□□□□ -0.65
UBFD1-202ENST00000563366 MAGEF1Q9HAY2 307 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms