RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SMC2O95347 1197 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 OAZ1P54368 228 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 CCDC173Q0VFZ6 552 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 GRB10Q13322 594 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 CUL4BQ13620 913 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 SNRNP48Q6IEG0 339 aaKnown RBP20.33■□□□□ 0.84
COMMD4-208ENST00000563220 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 SLFN12Q8IYM2 578 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.84
COMMD4-208ENST00000563220 PDLIM2Q96JY6 352 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 PNMA5Q96PV4 448 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 NAT10Q9H0A0 1025 aaKnown RBP20.33■□□□□ 0.84
COMMD4-208ENST00000563220 KCNH4Q9UQ05 1017 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 ATP2A1O14983 1001 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 RPS6P62753 249 aaKnown RBP20.32■□□□□ 0.84
COMMD4-208ENST00000563220 GADL1Q6ZQY3 521 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 BPIFA3Q9BQP9 254 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 EHMT1Q9H9B1 1298 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 RNF146Q9NTX7 359 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
COMMD4-208ENST00000563220 GTPBP6O43824 516 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-208ENST00000563220 PPIL2Q13356 520 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 SAMD3Q8N6K7 520 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 AOPEPQ8N6M6 819 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 OPTNQ96CV9 577 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 CALML4Q96GE6 196 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 ZNF408Q9H9D4 720 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 KBTBD4Q9NVX7 518 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
COMMD4-208ENST00000563220 RPTORQ8N122 1335 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 PARP14Q460N5 1801 aa20.31■□□□□ 0.84
COMMD4-208ENST00000563220 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-208ENST00000563220 STAT3P40763 770 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 SPIRE1Q08AE8 756 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 ECM1Q16610 540 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 KRT79Q5XKE5 535 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 TRIML1Q8N9V2 468 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 PROCA1Q8NCQ7 364 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-208ENST00000563220 SNX29Q8TEQ0 813 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 FAM20AQ96MK3 541 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 GSDMAQ96QA5 445 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 TAAR1Q96RJ0 339 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 RRAGDQ9NQL2 400 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-208ENST00000563220 BECN2A8MW95 431 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 PLCB2Q00722 1185 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 CEP55Q53EZ4 464 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 CUEDC2Q9H467 287 aa20.3■□□□□ 0.84
COMMD4-208ENST00000563220 ADCY5O95622 1261 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 GJA5P36382 358 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 MOGSQ13724 837 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 RNF207Q6ZRF8 634 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 PLA2G4DQ86XP0 818 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 IL31RAQ8NI17 732 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 PURBQ96QR8 312 aaKnown RBP20.29■□□□□ 0.84
COMMD4-208ENST00000563220 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 BLOC1S4Q9NUP1 217 aa20.29■□□□□ 0.84
COMMD4-208ENST00000563220 GOLGA6L19H0YKK7 550 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 MEIS1O00470 390 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 PEX10O60683 326 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 BAATQ14032 418 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-208ENST00000563220 TMEM119Q4V9L6 283 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 LBX2Q6XYB7 198 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 ARP10275 920 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 PLS1Q14651 629 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 NCAPHQ15003 741 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 KCNK18Q7Z418 384 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 SLC10A4Q96EP9 437 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 MAGEF1Q9HAY2 307 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 VAV3Q9UKW4 847 aa20.28■□□□□ 0.84
COMMD4-208ENST00000563220 ITGB5P18084 799 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 HYIQ5T013 277 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 MLKLQ8NB16 471 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 MXRA8Q9BRK3 442 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 BTBD7Q9P203 1132 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
COMMD4-208ENST00000563220 FRMPD4Q14CM0 1322 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 RPN1P04843 607 aaKnown RBP20.26■□□□□ 0.83
COMMD4-208ENST00000563220 CCT6AP40227 531 aaKnown RBP20.26■□□□□ 0.83
COMMD4-208ENST00000563220 TKFCQ3LXA3 575 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 STK17AQ9UEE5 414 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 AGTPBP1Q9UPW5 1226 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 PTPRFP10586 1907 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 SOCS7O14512 581 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 KLRC4O43908 158 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 EIF2AK2P19525 551 aaKnown RBP20.26■□□□□ 0.83
COMMD4-208ENST00000563220 CLCN1P35523 988 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 MRPS9P82933 396 aaKnown RBP20.26■□□□□ 0.83
COMMD4-208ENST00000563220 MCM6Q14566 821 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 PCNX4Q63HM2 1172 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 NCAPH2Q6IBW4 605 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 SLC5A5Q92911 643 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 RMDN3Q96TC7 470 aa20.26■□□□□ 0.83
COMMD4-208ENST00000563220 ASCC2Q9H1I8 757 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-208ENST00000563220 MED24O75448 989 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 PSMD10O75832 226 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 MYL1P05976 194 aa20.25■□□□□ 0.83
COMMD4-208ENST00000563220 CD44P16070 742 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms