RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 KIAA1107Q9UPP5 1409 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 TRAPPC8Q9Y2L5 1435 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
SMG1-206ENST00000562668 ZNF644Q9H582 1327 aaPredicted RBP6.97□□□□□ -1.29
SMG1-206ENST00000562668 ARHGEF5Q12774 1597 aa6.96□□□□□ -1.29
SMG1-206ENST00000562668 INO80Q9ULG1 1556 aaPredicted RBP6.96□□□□□ -1.29
SMG1-206ENST00000562668 KIDINS220Q9ULH0 1771 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 F8W031 263 aaPredicted RBP6.96□□□□□ -1.3
SMG1-206ENST00000562668 VAMP4O75379 141 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 CAP1Q01518 475 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 CPLX3Q8WVH0 158 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 SEC16BQ96JE7 1060 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 TGIF2Q9GZN2 237 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 RNF38Q9H0F5 515 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 LUC7LQ9NQ29 371 aaKnown RBP6.96□□□□□ -1.3
SMG1-206ENST00000562668 DBR1Q9UK59 544 aaKnown RBP6.96□□□□□ -1.3
SMG1-206ENST00000562668 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 PTPN23Q9H3S7 1636 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 ARHGEF40Q8TER5 1519 aa6.96□□□□□ -1.3
SMG1-206ENST00000562668 FGD6Q6ZV73 1430 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 ABCA6Q8N139 1617 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 ZC3H12DA2A288 527 aaKnown RBP6.95□□□□□ -1.3
SMG1-206ENST00000562668 C2orf71A6NGG8 1288 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 OTOL1A6NHN0 477 aaPredicted RBP6.95□□□□□ -1.3
SMG1-206ENST00000562668 PRR5P85299 388 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 KIAA1211LQ6NV74 962 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 VHLLQ6RSH7 139 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 HOMEZQ8IX15 550 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 NLGN1Q8N2Q7 840 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 LZTR1Q8N653 840 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 FAM169BQ8N8A8 192 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 FBLN5Q9UBX5 448 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 CFDP1Q9UEE9 299 aaPredicted RBP6.95□□□□□ -1.3
SMG1-206ENST00000562668 RWDD3Q9Y3V2 267 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 ZNF518AQ6AHZ1 1483 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 PLEKHH2Q8IVE3 1493 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 MLH3Q9UHC1 1453 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 CROCC2H7BZ55 1655 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 HECW2Q9P2P5 1572 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
SMG1-206ENST00000562668 MAGI2Q86UL8 1455 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 TRBV23OR9-2A0A075B6M9 112 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 ANKRD34BA5PLL1 514 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 RBM10P98175 930 aaKnown RBP6.94□□□□□ -1.3
SMG1-206ENST00000562668 ZNF513Q8N8E2 541 aaPredicted RBP6.94□□□□□ -1.3
SMG1-206ENST00000562668 TP53I13Q8NBR0 393 aaPredicted RBP6.94□□□□□ -1.3
SMG1-206ENST00000562668 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 NETO2Q8NC67 525 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 ALG3Q92685 438 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 TSPAN17Q96FV3 270 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 ACBD3Q9H3P7 528 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 CCSER2Q9H7U1 834 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 APEX2Q9UBZ4 518 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 ZFYVE16Q7Z3T8 1539 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 MAST1Q9Y2H9 1570 aa6.94□□□□□ -1.3
SMG1-206ENST00000562668 DNMT1P26358 1616 aaKnown RBP6.94□□□□□ -1.3
SMG1-206ENST00000562668 YEATS2Q9ULM3 1422 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 NPHP3-ACAD11A0A0J9YXS1 232 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 UNCXA6NJT0 531 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 FFAR3O14843 346 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 FOXD2O60548 495 aaPredicted RBP6.93□□□□□ -1.3
SMG1-206ENST00000562668 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
SMG1-206ENST00000562668 ASGR2P07307 311 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 NAT2P11245 290 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 ATF2P15336 505 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 SYN1P17600 705 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 PAMP19021 973 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 HNRNPMP52272 730 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMG1-206ENST00000562668 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
SMG1-206ENST00000562668 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
SMG1-206ENST00000562668 AFAP1Q8N556 730 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 GULP1Q9UBP9 304 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 FAN1Q9Y2M0 1017 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 PMF1-BGLAPU3KQ54 211 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 REREQ9P2R6 1566 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 ADGBQ8N7X0 1667 aa6.93□□□□□ -1.3
SMG1-206ENST00000562668 RRBP1Q9P2E9 1410 aaKnown RBP6.93□□□□□ -1.3
SMG1-206ENST00000562668 CCDC141Q6ZP82 1450 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 ATP7AQ04656 1500 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 ZNF143P52747 638 aaPredicted RBP6.92□□□□□ -1.3
SMG1-206ENST00000562668 FOXO4P98177 505 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 VWA3BQ502W6 1294 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 CPNE8Q86YQ8 564 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 PEX11GQ96HA9 241 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 MTA3Q9BTC8 594 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 EMC9Q9Y3B6 208 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 ABCC5O15440 1437 aa6.92□□□□□ -1.3
SMG1-206ENST00000562668 PLXNC1O60486 1568 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 KCNH1O95259 989 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 NCAM1P13591 858 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 PMLP29590 882 aa6.91□□□□□ -1.3
SMG1-206ENST00000562668 MC3RP41968 323 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms