RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 NEDD4P46934 1319 aa13.53□□□□□ -0.24
SCAMP2-202ENST00000562363 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
SCAMP2-202ENST00000562363 NBNO60934 754 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 GJB5O95377 273 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 CXCL10P02778 98 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 CKBP12277 381 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 TCTN1Q2MV58 587 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 TAAR1Q96RJ0 339 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 ABCB11O95342 1321 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 CCDC171Q6TFL3 1326 aa13.52□□□□□ -0.25
SCAMP2-202ENST00000562363 KIAA1217Q5T5P2 1943 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 SIP14410 1827 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 RBAK-RBAKDNI3L0D1 243 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 PARNO95453 639 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 ZNF286BP0CG31 522 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 PSEN2P49810 448 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 PDE1AP54750 535 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 STXBP2Q15833 593 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 DGKDQ16760 1214 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 FAM117BQ6P1L5 589 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 ESR2Q92731 530 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 RMDN3Q96TC7 470 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 RAD9AQ99638 391 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 ALG1Q9BT22 464 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 KATNAL1Q9BW62 490 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 HDAC6Q9UBN7 1215 aa13.51□□□□□ -0.25
SCAMP2-202ENST00000562363 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 FAM86C2PA6NEL3 165 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 F2P00734 622 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 MFSD10Q14728 455 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 PNMA1Q8ND90 353 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 WNT8BQ93098 351 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 MAF1Q9H063 256 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 UBE2ZQ9H832 354 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 DDX41Q9UJV9 622 aaKnown RBP13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 MRVI1Q9Y6F6 885 aa13.5□□□□□ -0.25
SCAMP2-202ENST00000562363 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 EFCAB14O75071 495 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 ERVK-21P61565 698 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 PTK7Q13308 1070 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 IKBKEQ14164 716 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 KIAA0753Q2KHM9 967 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 ARHGEF16Q5VV41 709 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 KAT14Q9H8E8 782 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
SCAMP2-202ENST00000562363 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 HAS3O00219 553 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 GPR37L1O60883 481 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 KDM4AO75164 1064 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 LAMC2Q13753 1193 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 TRIM71Q2Q1W2 868 aaKnown RBP13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 ASPRV1Q53RT3 343 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 ZNF618Q5T7W0 954 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 IQCA1Q86XH1 822 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 PPTC7Q8NI37 304 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 PXMP2Q9NR77 195 aa13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
SCAMP2-202ENST00000562363 ZNF213O14771 459 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 SORBS3O60504 671 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 LGR5O75473 907 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 EIF3JO75822 258 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 CFBP00751 764 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 NR3C2P08235 984 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 KCNA5P22460 613 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 MFAP1P55081 439 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 DHX37Q8IY37 1157 aaKnown RBP13.47□□□□□ -0.25
SCAMP2-202ENST00000562363 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms