RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 P2RX7Q99572 595 aaKnown RBP7.43□□□□□ -1.22
CAPN3-210ENST00000561817 GLIS2Q9BZE0 524 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-210ENST00000561817 DEFB129Q9H1M3 183 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 VCPKMTQ9H867 229 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 CBX8Q9HC52 389 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 TMEM260Q9NX78 707 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 PKD2L1Q9P0L9 805 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 SMCHD1A6NHR9 2005 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 PAPPA2Q9BXP8 1791 aa7.43□□□□□ -1.22
CAPN3-210ENST00000561817 A0A087WWV3 80 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC194A0A1B0GVG4 234 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 IQCA1LA6NCM1 817 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 TMEM232C9JQI7 657 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 FOXN1O15353 648 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ASNSP08243 561 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 CD46P15529 392 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 MCM7P33993 719 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 PRPHP41219 470 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 EPS15P42566 896 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 SARSP49591 514 aaKnown RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ADCY7P51828 1080 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ORC2Q13416 577 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 TNFAIP1Q13829 316 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 NONOQ15233 471 aaKnown RBP eCLIP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 CDC37Q16543 378 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 Q3C1V9 767 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ANO6Q4KMQ2 910 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 MSS51Q4VC12 460 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 NT5DC1Q5TFE4 455 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 JAKMIP3Q5VZ66 844 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 REXO1Q8N1G1 1221 aaKnown RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 SPATA20Q8TB22 786 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 SYMPKQ92797 1274 aaKnown RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 EPSTI1Q96J88 318 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 MBOAT7Q96N66 472 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 MTMR9Q96QG7 549 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 ARHGEF10LQ9HCE6 1279 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 BIN2Q9UBW5 565 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-210ENST00000561817 SERTAD1Q9UHV2 236 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 PRR12Q9ULL5 1215 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 PHIPQ8WWQ0 1821 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 DOCK1Q14185 1865 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 MYH7BA7E2Y1 1941 aa7.42□□□□□ -1.22
CAPN3-210ENST00000561817 H7C1D1 291 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 LAD1O00515 517 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 MEIS2O14770 477 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 IRF6O14896 467 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 POLR2DO15514 142 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 ZBTB24O43167 697 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 CAVIN2O95810 425 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 BMP6P22004 513 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 EPHX2P34913 555 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 LONP1P36776 959 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 SNAP25P60880 206 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 CCDC173Q0VFZ6 552 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 PNOCQ13519 176 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 STX1AQ16623 288 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 UBE2SQ16763 222 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 FAM83BQ5T0W9 1011 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 ANGEL2Q5VTE6 544 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 SASS6Q6UVJ0 657 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 RNF19BQ6ZMZ0 732 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 APOBEC3FQ8IUX4 373 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 SPICE1Q8N0Z3 855 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 TBCKQ8TEA7 893 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 LRRC15Q8TF66 581 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 KIAA1683Q9H0B3 1180 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 DNAJC25Q9H1X3 360 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 RANBP17Q9H2T7 1088 aaKnown RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 ANO10Q9NW15 660 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 KIAA1522Q9P206 1035 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-210ENST00000561817 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 IVNS1ABPQ9Y6Y0 642 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 PARP14Q460N5 1801 aa7.41□□□□□ -1.22
CAPN3-210ENST00000561817 RLFQ13129 1914 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 VWA3AA6NCI4 1184 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 SLC37A4O43826 429 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 TAL1P17542 331 aaPredicted RBP7.4□□□□□ -1.22
CAPN3-210ENST00000561817 CYP3A7P24462 503 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 INPP5BP32019 993 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 MRPL12P52815 198 aaKnown RBP7.4□□□□□ -1.22
CAPN3-210ENST00000561817 NLRP12P59046 1061 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 NCAPHQ15003 741 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 DPCR1Q3MIW9 517 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 PPP4R3AQ6IN85 833 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 LUZP1Q86V48 1076 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 FBXO11Q86XK2 927 aa7.4□□□□□ -1.22
CAPN3-210ENST00000561817 TEX2Q8IWB9 1127 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms