RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 C8orf74Q6P047 294 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 ANKS4BQ8N8V4 417 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 GOPCQ9HD26 462 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 NARFQ9UHQ1 456 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 RNF113AO15541 343 aaKnown RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 AFMP43652 599 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 METAP2P50579 478 aaKnown RBP eCLIP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 TOB1P50616 345 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 DYNC1I2Q13409 638 aaKnown RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 CDC37Q16543 378 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 IFI16Q16666 785 aaKnown RBP20.51■□□□□ 0.87
RAB40C-206ENST00000561781 FKBP15Q5T1M5 1219 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 NCOA7Q8NI08 942 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 TRIM4Q9C037 500 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 PANK4Q9NVE7 773 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 ZNF232Q9UNY5 417 aa20.51■□□□□ 0.87
RAB40C-206ENST00000561781 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
RAB40C-206ENST00000561781 PPP1R3GB7ZBB8 358 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 FOXP2O15409 715 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 VIMP08670 466 aaKnown RBP20.5■□□□□ 0.87
RAB40C-206ENST00000561781 ALDH3A1P30838 453 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 KIAA0753Q2KHM9 967 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 ANKRD20A2Q5SQ80 823 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 ANKRD20A1Q5TYW2 823 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 ANKRD20A3Q5VUR7 823 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 RALYLQ86SE5 291 aaKnown RBP20.5■□□□□ 0.87
RAB40C-206ENST00000561781 SWAP70Q9UH65 585 aa20.5■□□□□ 0.87
RAB40C-206ENST00000561781 LIMA1Q9UHB6 759 aaKnown RBP20.5■□□□□ 0.87
RAB40C-206ENST00000561781 GPR75-ASB3A0A0A6YYF3 556 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 DPPA5A6NC42 116 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 TPP2P29144 1249 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-206ENST00000561781 MRPS35P82673 323 aaKnown RBP20.49■□□□□ 0.87
RAB40C-206ENST00000561781 PPARAQ07869 468 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 TSR1Q2NL82 804 aaKnown RBP20.49■□□□□ 0.87
RAB40C-206ENST00000561781 PPP1R15BQ5SWA1 713 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 NUGGCQ68CJ6 796 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 LRIG3Q6UXM1 1119 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 NOSTRINQ8IVI9 506 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 MYD88Q99836 296 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 FAM167BQ9BTA0 163 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 TAB2Q9NYJ8 693 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 WDR35Q9P2L0 1181 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 CEP131Q9UPN4 1083 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 CTNND2Q9UQB3 1225 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 ASB3Q9Y575 518 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 GCOM1H8Y6P7 765 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-206ENST00000561781 MYZAPP0CAP1 466 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
RAB40C-206ENST00000561781 GCKRQ14397 625 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 CCDC197Q8NCU1 140 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 MIPOL1Q8TD10 442 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 WHAMMQ8TF30 809 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 OSBP2Q969R2 916 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 NEUROD6Q96NK8 337 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 LACRTQ9GZZ8 138 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 ECM29Q5VYK3 1845 aa20.49■□□□□ 0.87
RAB40C-206ENST00000561781 RCCD1A6NED2 376 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 LRRC10BA6NIK2 292 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 ECEL1O95672 775 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 DPYDQ12882 1025 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 BIRC3Q13489 604 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 TBC1D1Q86TI0 1168 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 NAF1Q96HR8 494 aaKnown RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 KCNMB3Q9NPA1 279 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 GDF3Q9NR23 364 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 MYO5AQ9Y4I1 1855 aaKnown RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 TTC26A0AVF1 554 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 FGAP02671 866 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 ADRA2BP18089 450 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 LBRQ14739 615 aaKnown RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 SETDB1Q15047 1291 aa20.48■□□□□ 0.87
RAB40C-206ENST00000561781 MYLK4Q86YV6 388 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-206ENST00000561781 ATP2A2P16615 1042 aaKnown RBP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 TCP1P17987 556 aaKnown RBP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 MATR3P43243 847 aaKnown RBP eCLIP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 TAF11Q15544 211 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 PLBD2Q8NHP8 589 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 RAPGEF5Q92565 580 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 C2CD2Q9Y426 696 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 DUSP10Q9Y6W6 482 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 BTBD18B2RXH4 712 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 SH2B2O14492 632 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 ORC4O43929 436 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 CYLC1P35663 651 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 CD151P48509 253 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 SPAG1Q07617 926 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 CCDC96Q2M329 555 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 SGSM1Q2NKQ1 1148 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 WDR59Q6PJI9 974 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 CACNA2D4Q7Z3S7 1137 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 ZNF579Q8NAF0 562 aaKnown RBP20.47■□□□□ 0.87
RAB40C-206ENST00000561781 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 NFU1Q9UMS0 254 aa20.47■□□□□ 0.87
RAB40C-206ENST00000561781 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms